Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0942 ATGGGTCGTGGAAGATTACCCATGAAACTTATAGAGAAGGAGAAATCACGCAAAGCAACCTTTCACAAAAGAAAAAATGGAATAATGAAAAAAGCTCATGAACTCTCTACCCTCTGTGGAGTCGACACCTGCGTCATTCTCTATAGCCCTAATTCTAACAGCGACCAATCCGAGACCTGGCCTCAAGATCCCAGAGAGGTACGGCGGATTATCGGGAGGTACGAGGCGAGCATGGCGGAGAGACGGCCGAAGAACTACGACGTGTCGGAGTTCTTCAAGGATCGAAAGAACAAGGTGGAAGCCGAGGCTTCGAAACTCCACAAGGAGAGGCTGAAGATGCTGTATCCGACGTGGGACAAGAGATTCGACGTGCTTGGAGAGGAGGAGCTGAGGAGGTTGGTGAGCGTGTTGGATGCGAAGATCGAGGATTGCAGACAGAGGATTAACATGATGAAGAAGAAGCATTATCTGAAGGAGAAACAGTTGGAATCCGATGTTAACGTCTCGAACAGGAGTCACCTGTGTTTCTTGCACAACACGTCAACGTCTCAAACCCTAGAGTTGTCCAGGTCTCATCAGTTGATGCTGTCCTCTGATCCAAATCTGATGCATTTGATGATGACCCAGAATGTTGATGATAATATTATTAATAATGGAGGAGCTGGGATTTACTCATCGGATTCATCTTCTTCGTTGAACTATTACAGTAATTACTATGGTTCTCTGCAGAAATTTGCTTCACAGAATAATAATGTAATGATGATGCAGTATGATCATCAGGTTGAAGCAAATTTGCAGGGACTCATCCCACCTGATCTGATGTTTCAGACGAATTATGGATACCATCATGATCTGCTTCAACCTCATCAGATGTTCAACTGTTTGAGCGAGAAAAAGGTGATGGATTTGCAGCAACGATCTTGA 924 0.4481 MGRGRLPMKLIEKEKSRKATFHKRKNGIMKKAHELSTLCGVDTCVILYSPNSNSDQSETWPQDPREVRRIIGRYEASMAERRPKNYDVSEFFKDRKNKVEAEASKLHKERLKMLYPTWDKRFDVLGEEELRRLVSVLDAKIEDCRQRINMMKKKHYLKEKQLESDVNVSNRSHLCFLHNTSTSQTLELSRSHQLMLSSDPNLMHLMMTQNVDDNIINNGGAGIYSSDSSSSLNYYSNYYGSLQKFASQNNNVMMMQYDHQVEANLQGLIPPDLMFQTNYGYHHDLLQPHQMFNCLSEKKVMDLQQRS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0942 307 CDD MADS 2 61 - -
Bisa04g0942 307 Gene3D - 13 99 IPR036879 GO:0003677|GO:0046983
Bisa04g0942 307 SUPERFAMILY SRF-like 2 86 IPR036879 GO:0003677|GO:0046983
Bisa04g0942 307 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bisa04g0942 307 ProSiteProfiles MADS-box domain profile. 1 52 IPR002100 GO:0003677|GO:0046983
Bisa04g0942 307 PANTHER MADS BOX PROTEIN 3 151 - -
Bisa04g0942 307 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bisa04g0942 307 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bisa04g0942 307 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bisa04g0942 307 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 52 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0942 Bisa-ChrBisa04 22748944 22749972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0942 1 147 Type I MADS-box Gene Family AT5G55690 37.748 4.22e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bisa04g0942 SRF-TF 9.9e-20 No_clan