Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0933 ATGGAGACGGAGCCTCTGCTAACGTATTTCAGCCCCAAAAAGAAGCCCTTGCCATCAGTACTCACGCCGCTGCCGGAGGACAACGAGATTAATATTCCGATAAACCCATCGGAGATCAAGGACTGCCTTATCTTCGGCTCTCCGTCTACCTTTGAAGAATCTGCCCCATTAGTTGAAGCAATAACGCTTTCCCTTAATTCCCCCAAAGCTTCTTCTTCTCAATCTCAACAAACCCAACAAACTCAACAATCTTACCCTGGCGACTCCACTTGCAAGTGGAAGAAAACTAATTTCCATCGCTGTAAAACCGCGCCGGCCATGGTTGTAATCTGCGATTCTCCAAATCACCAACCCGCTGAGCCTAAACCCCAGTTTGTTTCAGATTCGATTATTCAGCAAGCGGTTCTTCTTCTTCTTGTTTATTTGTCGTGCGGAGTGCTTATCTATTGGTTCAATCGTCAAAGTTTTAAGGCAGAAAAGACTAATCATTTTGTGGATGGGTTGTATTATTGTGTAGTGACAATGTGTACAATAGGCTACGGTGATATCGTTCCTAATAGTCCAGCAACGAAGATTTTCTCTATTCTGTTTGTGTTGGTGGGTTTTGGGTTTGTTGACATATTGCTTAGTGGGATGCTCAGTTATGTTCTTAATTTGCAGGAGAGTCACTTACTTAAGACAGTGGATAATAGGGGTGAGAAGGACAAGAATTCGTATATAATAGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTTGTGGTCTTTTGTATTGGGGTCGGTGTCTGTGTTCTACATTTTGTGGAGAGGCTTGGTTGGTTGGATTCCTTGTATCTTTCTGTTATGTCGGTTACGACCGTTGGCTATGGCGACAATGCATTCAAGTCAGTGCACGGTCGAATGTTTGCTGCAATTTGGTTGCTTGTGTCCACTCTTGCAGTGGCCCGAGCTTTCCTCTATTTGGCTGAGGCAAGAGTGGATAGGCGAAATAGACAGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTCTCTCAGTTTCTTGCTGCAGACTTAGACAATAATGGCTTTGTGAGTAAATCAGAATTTGTCATATACAAGCTCAAGGAGATGGGAAAAGTGGCGGATAAAGACATCATGCAGGTTTGCCAGAAATTTGACAGGCTAGATTCTGGCAATTGTGGAAAATTAAGTCTTTCTGATCTAATGGAGGCTCATCAGCGATAA 1248 0.4375 METEPLLTYFSPKKKPLPSVLTPLPEDNEINIPINPSEIKDCLIFGSPSTFEESAPLVEAITLSLNSPKASSSQSQQTQQTQQSYPGDSTCKWKKTNFHRCKTAPAMVVICDSPNHQPAEPKPQFVSDSIIQQAVLLLLVYLSCGVLIYWFNRQSFKAEKTNHFVDGLYYCVVTMCTIGYGDIVPNSPATKIFSILFVLVGFGFVDILLSGMLSYVLNLQESHLLKTVDNRGEKDKNSYIIDVKKGRMRIRMKVALALGVVVFCIGVGVCVLHFVERLGWLDSLYLSVMSVTTVGYGDNAFKSVHGRMFAAIWLLVSTLAVARAFLYLAEARVDRRNRQMAKWILGQDMTVSQFLAADLDNNGFVSKSEFVIYKLKEMGKVADKDIMQVCQKFDRLDSGNCGKLSLSDLMEAHQR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0933 415 SUPERFAMILY EF-hand 346 412 IPR011992 -
Bisa04g0933 415 MobiDBLite consensus disorder prediction 69 88 - -
Bisa04g0933 415 SUPERFAMILY Voltage-gated potassium channels 132 215 - -
Bisa04g0933 415 FunFam Two-pore potassium channel 3 237 351 - -
Bisa04g0933 415 Gene3D - 128 229 - -
Bisa04g0933 415 Gene3D - 238 350 - -
Bisa04g0933 415 SUPERFAMILY Voltage-gated potassium channels 244 350 - -
Bisa04g0933 415 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 135 388 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa04g0933 415 Pfam Ion channel 137 215 IPR013099 -
Bisa04g0933 415 Pfam Ion channel 261 329 IPR013099 -
Bisa04g0933 415 ProSitePatterns EF-hand calcium-binding domain. 358 370 IPR018247 -
Bisa04g0933 415 PRINTS Two pore domain K+ channel signature 173 201 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa04g0933 415 PRINTS Two pore domain K+ channel signature 292 301 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0933 Bisa-ChrBisa04 22551422 22571448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0933 3 412 Ion Channels AT4G18160 58.469 3.74e-165 469