Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0879 ATGAGCGAGGAAGGCAAGAACAGGGCAATCGCCATCGATTTCCCCAACCAGCCATACTATGGCACGTTTCAAGGCGTCGCCAACTACTATCCTCCTCCTCTGCCACCGCACCCACAGTGGCAGGTGGCCGCCTTCCCTCAGCCCATTCCGCCACCGGGAACGTATGGGGGTCCCCAGTATTACCACCAAGGATACCAAACCGTTCCAGGTTATACTGTTGTTGAAGTAAGGCCTATGAGAGAACATCGTCTTCCTTGTTGCGGACTTGGTCTGAGTTGGTTCTTGTTTATAATGGGTTTCTTTCTTGGTGGCCTTCCGTGGTATATTGGAACTTTCATTCTAATATGTGTACATATGGATTACAGAGAAAAGCCTGGATTAATTGCTTGCACAGTTGCCTCCGCCATCGCTGTGATAGCTGTAACTTTTGGTATTACAAATAAAGCAACAGTGAGAGAGAGGGAGGGGGAGAGAGGGGCTTCAAGTTCTTCCTGTGTTCAACTTCTCTCAGAAATGGTTACCTTCAGGTTCCACCAGTACCAGGTCGTTGGGAGGGCTCTGCCCACGGAAGCAGATGAGCACCCAAAGATTTACCGCATGAAGCTCTGGGCCACGAACGAAGTTCGCGCCAAGTCGAAGTTCTGGTATTTTTTGAGGAAGCTAAAGAAGGTTAAGAAGAGCAATGGTCAGGTTCTTGCTATCAATGAGATTTTTGAGAAGAACCCAACCAAGATCAAGAACTACGGCATTTGGTTGCGTTACCAGAGTAGGACTGGCTACCACAACATGTACAAAGAGTTCCGTGATACCACTCTTAACGGTGCGGTTGAGCAGATGTACAATGAGATGGCATCCCGTCACAGGGTCCGGTTCCCCTGCATTCAAATCATTAAGACTGCCACCGTCCCAGCTAAGCTTTGCAAAAGAGAGAGCACCAAGCAATTTCACAACTCCAAAATTAAGTTCCCATTGGTTTACAGGAAGGTGAGGCCACCCACAAGGAAGCTTAAAACCACATACAAGGCAACAAGGCCTAACTTGTTTATGTAA 1050 0.481 MSEEGKNRAIAIDFPNQPYYGTFQGVANYYPPPLPPHPQWQVAAFPQPIPPPGTYGGPQYYHQGYQTVPGYTVVEVRPMREHRLPCCGLGLSWFLFIMGFFLGGLPWYIGTFILICVHMDYREKPGLIACTVASAIAVIAVTFGITNKATVREREGERGASSSSCVQLLSEMVTFRFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYRKVRPPTRKLKTTYKATRPNLFM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0879 349 Gene3D - 166 241 - -
Bisa04g0879 349 Gene3D - 242 314 - -
Bisa04g0879 349 Hamap 50S ribosomal protein L18Ae [rpl18a]. 177 240 IPR028877 -
Bisa04g0879 349 PANTHER 60S RIBOSOMAL PROTEIN L18A 173 348 IPR028877 -
Bisa04g0879 349 FunFam 60S ribosomal protein L18a 243 318 - -
Bisa04g0879 349 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 178 299 IPR023573 GO:0003735|GO:0005840|GO:0006412
Bisa04g0879 349 FunFam 60S ribosomal protein L18a 172 242 - -
Bisa04g0879 349 SUPERFAMILY RplX-like 242 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0879 Bisa-ChrBisa04 21051384 21067593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0879 171 349 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.061 5.79e-120 343