Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0878 ATGCAAACGCAGTCTTTAGTTTCACTTGGCAAGGGTTTTCGCGTCGCCGGAGCACAGGGTAGTGGCCTCCAAGACCTTAGCGTTCAACCTCGTCGTCCCGCAACCATGTCAAGGAGAAAGGTTAGGGAGCCAAAGGAAGAGAATGTGACTCTTGGTCCAGCTGTCAGAGATGGCGAACATGTTTTTGGCGTGGCCCATATCTATGCATCTTTTAATGACACTTTTATTCATGTGACTGATCTGTCCGGGAGGGAAACCCTTGTTCGCATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAGTCATCCCCTTATGCTGCTATGCTTGCAGCACAGGATGTATCTGCTAGATGCAAGGAGCTTGGCATAACTGCTCTTCATATCAAGCTCCGTGCCACTGGTGGAAACAAGACAAAAACACCAGGTCCTGGTGCTCAGTCTGCTCTCCGTGCTCTCGCTCGTTCAGGAATGAAAATTGGAAGGATAGAGGATGTGACTCCTATTCCTTCTGATAGCACACGTAGAAAGGGTGGTAGAAGAGGTAGAAGGCTTTAA 558 0.4875 MQTQSLVSLGKGFRVAGAQGSGLQDLSVQPRRPATMSRRKVREPKEENVTLGPAVRDGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0878 185 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 38 180 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bisa04g0878 185 MobiDBLite consensus disorder prediction 22 45 - -
Bisa04g0878 185 SUPERFAMILY Translational machinery components 58 183 - -
Bisa04g0878 185 ProSitePatterns Ribosomal protein S11 signature. 150 172 IPR018102 -
Bisa04g0878 185 Gene3D Ribosomal protein S11 36 185 IPR036967 GO:0003735|GO:0005840|GO:0006412
Bisa04g0878 185 MobiDBLite consensus disorder prediction 165 185 - -
Bisa04g0878 185 Pfam Ribosomal protein S11 63 181 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bisa04g0878 185 Hamap 30S ribosomal protein S11 [rpsK]. 31 182 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bisa04g0878 185 FunFam 40S ribosomal protein S14 36 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0878 Bisa-ChrBisa04 21022435 21028434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0878 36 174 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 89.928 1.33e-92 265