Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0871 ATGTCATTTTCCTTTGCAAAATACTTCTTCCAGAGGCTGTGGTTAGATGAATTCCACATGGGAAGTTTTGCCCATAGCAGCTTTCTGTCTAATGATTTCCTGCCATCTCTTGGAGGCCGAATTGACCGGGAAATCAGACTCCGAAAACACATAATCTCCCCGTTTGATCCACGATATAGGGCTTGGGAGATGTTGCTGGTAGTTCTAGTCATTTACTCGGCCTGGATTTGCCCATTTGAGTTCGCCTTTCTGCCTTCCAAGCAATATACACTATTGATCATTGATAATGTTGTCAATGTCTTCTTTGCCATTGACATCACTCTGACATTCTTTGTTGCATATCTAGATAGTCAATCTTACCTCCTTGTTGACGATCCTAGGAGAATTGCAGTTAGGTATATATCTACCTGGTTTATATTTGATGTCTGCTCAACGGCACCATTTCAGTTCACCAGCCTCCTCTTCACTAATCATAGCAGTAATCTTGCTTTTCAACTTCTTAGCATGCTCCGATTATGGCGTCTGAGACGAGTCAGCTCTCTGTTTGCAAGACTTGAGAAGGACCTCCGCTTCAATTATTTTTGGACTAGGTGCATAAAACTCATTGCTGTAACTCTGTTTGCAGTACACTGTTCCGGATGCTCTTACTATCTAATTGCAGAAAAGTACCATGATCCCAAAAGGACCTGGATTGGTGCAGTGTACCCAGATTTCAGAGAAGAAAGTCTGTGGGTCAGATATGTGACTGCAGTCTATTGGTCCATTGTCACACTTACCACTACTGGCTATGGGGATTTACATGCTCAAAACCCTGGAGAGATGCTGTTTGATATCTTGTACATGCTGTTCAACCTGGGATTAACATCATACATCATTGGGAACATGACAAACCTTGTAGTCCACTGGACCAGCCACACCAGAGATTTTAGGGAGACAGTCAAATCAGCAACAGAATTTGCATCAAGGAATCATTTGCCCCATCACATACAAGATCAAATGTTGTCACACTTATGTCTGAGGTTTAAAACAGAAGGATTGAAGCAGCAAGAAACATTAAATAGTCTACCTAAGACAATTCGTTCAAGCATTGCAAATCATCTCTTCTTTCCTGTTGTGAAGGAGGCCTACCTGTTCCGTGGAGTTTCCCGTGACTTCCTTTTCCAACTGGTCTCGGAAATGGAAGCTGAGTATATTCCACCCAAAGAAGATGTGATACTGCAAAATGAGGCTCCTACAGACCTTTATGTGCTTGTTTCAGGGGCAGTGGATCTTATTTGCCACATGGATGGGCATGATCAAGTTCTCGGGAAGGCAATTTCGGGAGAAACATTTGGGGAAGCTGGGATTCTATACTACAGGCGACAGCCTTTCACAGTTCGGACTACGGAGCTTTCTCAAATTTTAAGACTCAACAGAACTTCATTAATGAATGCTATACAAGCATATCCAGAAAATTCACAAATTATAATAAATAACTTTTTCATGAGATTAAAGGGACAAGAGGACTTGGGCTTTGAATATCCACGTGCAGATCCTGGTTTGGTTCTTCATGAAAAACTGGATGGAGGACAAACAAGACAAAGCTTTTCTCATGCATGTACAAACCATTCAAACGGGGATTCATTGGTCCAGGAAGGAAGGTATAGAGACTTCAGAGACTCAGAGATTAGATTGCATAAGGTGACAAATGAGGATGGTGAAAAAGAAATTAAAAGGGAAAGATCAGATGAATATAGAATAGAACTCGCGGAGCCAGAAATTCTTAACCACCCTAGGAATGACCCAACCAGAAAGAGAAGAGAAGATGATTCAAAATCTATCAACTTCCCGTTAGAGAATGTATACAAAAACTCCTGTTCAAGTAATCCTGGCCGTCCAAGTAATAGAGAAGTGAAAAGATTCATCAAGAAGAGAGTTACAATTCACTTGCTAGGCGAGAGTGAGAGTTCGTCAAATGGACAGCATGGGAAGTTGATAATTCTACCTGATTCAATAGAAGAGCTGCTCAAGATTGCTGATGAAAAATTTGGAGGATCAAAACCTACAAAAGTTACAAATACAGAGGATGCAGAGATTGATGACATAAGCGTCATTAGAGATGGTGATCACCTGTTTCTTCATTGCAGCAGTAGTGAAAATTTGCAGTCATGA 2151 0.4119 MSFSFAKYFFQRLWLDEFHMGSFAHSSFLSNDFLPSLGGRIDREIRLRKHIISPFDPRYRAWEMLLVVLVIYSAWICPFEFAFLPSKQYTLLIIDNVVNVFFAIDITLTFFVAYLDSQSYLLVDDPRRIAVRYISTWFIFDVCSTAPFQFTSLLFTNHSSNLAFQLLSMLRLWRLRRVSSLFARLEKDLRFNYFWTRCIKLIAVTLFAVHCSGCSYYLIAEKYHDPKRTWIGAVYPDFREESLWVRYVTAVYWSIVTLTTTGYGDLHAQNPGEMLFDILYMLFNLGLTSYIIGNMTNLVVHWTSHTRDFRETVKSATEFASRNHLPHHIQDQMLSHLCLRFKTEGLKQQETLNSLPKTIRSSIANHLFFPVVKEAYLFRGVSRDFLFQLVSEMEAEYIPPKEDVILQNEAPTDLYVLVSGAVDLICHMDGHDQVLGKAISGETFGEAGILYYRRQPFTVRTTELSQILRLNRTSLMNAIQAYPENSQIIINNFFMRLKGQEDLGFEYPRADPGLVLHEKLDGGQTRQSFSHACTNHSNGDSLVQEGRYRDFRDSEIRLHKVTNEDGEKEIKRERSDEYRIELAEPEILNHPRNDPTRKRREDDSKSINFPLENVYKNSCSSNPGRPSNREVKRFIKKRVTIHLLGESESSSNGQHGKLIILPDSIEELLKIADEKFGGSKPTKVTNTEDAEIDDISVIRDGDHLFLHCSSSENLQS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0871 716 PANTHER POTASSIUM CHANNEL AKT1 25 545 IPR045319 GO:0005249|GO:0006813
Bisa04g0871 716 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g0871 716 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g0871 716 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g0871 716 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g0871 716 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g0871 716 Gene3D Helix hairpin bin 301 367 - -
Bisa04g0871 716 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Bisa04g0871 716 FunFam Potassium channel KAT3 61 301 - -
Bisa04g0871 716 Pfam KHA, dimerisation domain of potassium ion channel 637 706 IPR021789 -
Bisa04g0871 716 Gene3D Jelly Rolls 372 502 IPR014710 -
Bisa04g0871 716 MobiDBLite consensus disorder prediction 587 606 - -
Bisa04g0871 716 Gene3D - 60 300 - -
Bisa04g0871 716 CDD CAP_ED 377 490 IPR000595 -
Bisa04g0871 716 ProSiteProfiles KHA domain profile. 638 716 IPR021789 -
Bisa04g0871 716 SMART cnmp_10 377 494 IPR000595 -
Bisa04g0871 716 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa04g0871 716 Pfam Cyclic nucleotide-binding domain 398 481 IPR000595 -
Bisa04g0871 716 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Bisa04g0871 716 FunFam Potassium channel KAT2 365 501 - -
Bisa04g0871 716 SUPERFAMILY cAMP-binding domain-like 304 496 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0871 Bisa-ChrBisa04 20750025 20755444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0871 1 706 Ion Channels AT5G46240 59.414 0.0 865