Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0859 ATGCCATGGCAATCGTCTTCATTGAGTTTGGGGGAGGGAGCTGTCTCGTCGGTGTTCTCAGTTGAGTTGACGAGGAGAGTGGTGTTTGCTGGTCCCCCCGCCCCCCCGGTGCGAGATTCAGAGCTTTTTCTCTGTCATTTTCATTCATCGGAGGAAATGGCCCACGAACCTTTGTCCACTCGCTGGTCTTTCAAGGATTTTCGATTTTTCTACGACGCGAAGTTTAATGGGAAGAAAATCACGGACGATGACGAGAGTGCAGATAAAATGGACAGTAATGGGAGTTCTTCGGCCGCTACGTCCAATGGCAATAATCATGCCAAAAAGACATCGGAAATGGCTATCTATGAACAGTTTCAAACCCAGGGGCAGAATTCGACTCACTCAAATGGATTCTCACCAAATCATATGGATGAAAGGCCGGCAAAGTCTTTGCTTCCACCTTTTGAATCTGCTGAAATGCGTGCATTAGGAGAAAGCTTAAGTAGGGATATCATTCGTGGGAGTCCAAATGTGACGTGGGAAAGCATCAAGGGGTTAGAGAACGCCAAACGTTTGTTGAAAGAGGCTGTCGTGATGCCAATTAAGTATCCCAAGTACTTCACTGGTCTACTATCACCTTGGAAAGGTATTCTTCTGTTTGGCCCTCCTGGGACTGGAAAGACAATGCTTGCCAAGGCAGTTGCAACAGAGTGCAAGACTACATTTTTTAATATTTCAGCATCGTCTGTTGTCAGCAAATGGCGAGGTGATTCAGAGAAGTTGGTGAAGGTGTTATTTGAGCTGGCTAGACACCATGCACCCTCAACTATATTTCTTGATGAAATTGATGCAATAATTAGTCAACGTGGTGAAGCACGCAGTGAGCACGAGGCAAGTAGACGGCTAAAGACTGAGCTACTCATTCAGATGGACGGTTTGATGAGGACCAATGAACTTGTTTTTGTTTTGGCGGCGACAAATCTTCCCTGGGAACTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTTGTACCACTTCCAGAACCAGAAGCAAGAAGAGCAATGTATGAGGAACTGCTTCCATCACATCAGGGTGAGGAGCAGATTCCCTATGATTTATTAGTGGATCAATCGGAAGGATATTCAGGCTCAGACATCCGGTTACTCTGTAAAGAGGCAGCAATGCAGCCCTTGAGACGCCTAATGTTACAGCTTGAACAGAAACAAGAGGTGGTGCCAGAAGAAGAGTTACCAAAAGTGGGGCCTATTAGACCTGAAGATATAGCCACAGCTTTAAAGAACACAAGGCCATCTGCTCATCTGCTTGCCCATAAATATGAAAAGTTCAATGCTGATTATGGTAGTCAAATACTACAATGA 1368 0.4576 MPWQSSSLSLGEGAVSSVFSVELTRRVVFAGPPAPPVRDSELFLCHFHSSEEMAHEPLSTRWSFKDFRFFYDAKFNGKKITDDDESADKMDSNGSSSAATSNGNNHAKKTSEMAIYEQFQTQGQNSTHSNGFSPNHMDERPAKSLLPPFESAEMRALGESLSRDIIRGSPNVTWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLMRTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMYEELLPSHQGEEQIPYDLLVDQSEGYSGSDIRLLCKEAAMQPLRRLMLQLEQKQEVVPEEELPKVGPIRPEDIATALKNTRPSAHLLAHKYEKFNADYGSQILQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0859 455 FunFam Katanin p60 ATPase-containing subunit A-like 2 343 431 - -
Bisa04g0859 455 PANTHER AAA DOMAIN-CONTAINING 93 451 - -
Bisa04g0859 455 MobiDBLite consensus disorder prediction 81 107 - -
Bisa04g0859 455 CDD RecA-like_VPS4-like 177 340 - -
Bisa04g0859 455 FunFam Katanin p60 ATPase-containing subunit A-like 2 170 355 - -
Bisa04g0859 455 MobiDBLite consensus disorder prediction 91 107 - -
Bisa04g0859 455 Pfam AAA+ lid domain 369 404 IPR041569 -
Bisa04g0859 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 434 IPR027417 -
Bisa04g0859 455 SMART AAA_5 207 344 IPR003593 GO:0016887
Bisa04g0859 455 Gene3D - 343 431 - -
Bisa04g0859 455 Gene3D - 170 445 IPR027417 -
Bisa04g0859 455 Pfam ATPase family associated with various cellular activities (AAA) 211 341 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0859 Bisa-ChrBisa04 20101755 20129747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0859 205 414 Calmodulin-binding Proteins AT3G56690 35.681 4.48e-30 122