Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0833 ATGGACTCAAAAACTAGTAGTAGAGCTCCCCAAAAACAGCACCCGAAGACGGCTGGGATTCAAACAGTCGAGGCAAAAGACAGCAGGTCTTCTTTGCTGCCGGTTTCAAAGACAGGTAAGCCCGAACCGGCTGCACCTCAAGATTTGTCAAAACCTGTTCAAATTACATCAAAGCAGTGTATTGGAGAAACTTCTGAAAACAAGAAGTTGGGAATTTCAAACCATAAAGAGTCTGCTGACTCCTTGATTAGTAAATTTGGTTCTGCTGTTTCCTTATCTGCTAATGATCAAGCATCTGGAGGAGTTGACCGTGTTGTTATTGGGAATAGAGGCTTGCAGGAAAATTCTATTGATCAAGAAAAGAAGACATCTGAGTATGGAAGTGTGAAGAATAGTTCTGTTTCTGCCAAAGTTAGCGATGGGGCGAGCAGTTTGGCAAAGACGAGTGGAAGTGCCAAGATTAGTGATCGAGCCGATTTTGTTGAGAGTGGTAAGAGCAGTATATGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGCACATGTAGCAGCTTGAGTACCAGCGTCAACAAGCCTCACAAGGCGAATGACTTGAGATGGGAAGCCATTCAAGCAGTCCGAGCTAAGGAAGGGGTGCTTGGTTTAGGTCACTTTAGACTTCTGAAGAGGCTAGGTTGTGGGGATATCGGGAGTGTGTATCTCTCTGAGTTGAGTGGAACTAAATGTTATTTTGCAATGAAGGTAATGGACAAAGCATCCCTAGCAAGTCGTAAGAAGCTGCTTCGTGCTCAGACAGAGAGAGAAATTTTGCAGTCCCTAGACCATCCCTTTCTCCCAACTTTGTATACCCATTTTGAAACAGAGAAGTTCTCATGCTTGGTAATGGAATTTTGCCCAGGTGGAGACCTTCACACTCTCAGGCAGAGGCAGCCAGGGAAGCATTTTCCAGAGCAAGCAGTAAAGTTTTATGTGGCAGAGGTGCTGCTGGCTTTGGAGTACCTCCACATGCTCGGAATTGTCTACCGCGACCTCAAGCCAGAAAATGTCCTTGTTAGGGATGATGGACATATTATGCTCTCTGACTTTGACCTTTCCCTCCGTTGTGCTGTTAGTCCAACTCTTGTTAAAGGCTCAATCATGGAATCTGAGCCTTTGAGAAAGAATCCTGTATATTGTGTCCAGCCCGCATGCATCGAGCCACCCTCCTGCATTCAGCCATCCTGTGTTGCTCCTACAACATGCTTTTCGCCCCGGCTCTTTTCTAGCAAATCAAAGAAGGATCGCAAACCTAAAACTGAAATCGGAAACCAAGTGAGTCCATTACCCGAGCTCATAGCTGAGCCTACCGATGCTCGATCCATGTCATTTGTTGGAACCCATGAATACTTGGCACCTGAGATCATTAAGGGCGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATACGAACTGTTATTTGGTAAAACTCCTTTTAAGGGGTCTGGGAATCGAGCCACATTGTTTAACGTTGTTGGTCAGCCTCTTAGATTTCCTGAAGCACCTGTTGTCAGTTTTGCTGCAAGGGATCTCATAAGGGGGTTGCTTGTGAAGGAACCACAGCACAGGTTGGCATATAAACGAGGGGCCACCGAGATTAAGCAGCATCCCTTTTTTGAAGGTGTGAATTGGGCACTGATCCGCTGTGCTACCCCGCCGGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCAGCCACTTCTGGCAGCGAAAAAGCCGTTAACCATATGTCAATTCCTGATCAAAAAGGGTCTGGTAATTATCTGGAGTTTGATTTCTTCTAA 1845 0.4585 MDSKTSSRAPQKQHPKTAGIQTVEAKDSRSSLLPVSKTGKPEPAAPQDLSKPVQITSKQCIGETSENKKLGISNHKESADSLISKFGSAVSLSANDQASGGVDRVVIGNRGLQENSIDQEKKTSEYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSLSTSVNKPHKANDLRWEAIQAVRAKEGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKGSIMESEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPATSGSEKAVNHMSIPDQKGSGNYLEFDFF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0833 614 Gene3D Transferase(Phosphotransferase) domain 1 451 575 - -
Bisa04g0833 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Bisa04g0833 614 ProSiteProfiles Protein kinase domain profile. 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0833 614 FunFam Serine/threonine-protein kinase AGC1-7 450 575 - -
Bisa04g0833 614 MobiDBLite consensus disorder prediction 165 189 - -
Bisa04g0833 614 MobiDBLite consensus disorder prediction 10 35 - -
Bisa04g0833 614 MobiDBLite consensus disorder prediction 166 189 - -
Bisa04g0833 614 FunFam Serine/threonine-protein kinase D6PK-like 217 302 - -
Bisa04g0833 614 SUPERFAMILY Protein kinase-like (PK-like) 199 584 IPR011009 -
Bisa04g0833 614 MobiDBLite consensus disorder prediction 1 56 - -
Bisa04g0833 614 FunFam serine/threonine-protein kinase D6PK-like 303 370 - -
Bisa04g0833 614 Pfam Protein kinase domain 220 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0833 614 Pfam Protein kinase domain 454 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0833 614 CDD STKc_phototropin_like 218 576 - -
Bisa04g0833 614 Gene3D Transferase(Phosphotransferase) domain 1 303 370 - -
Bisa04g0833 614 Gene3D Phosphorylase Kinase; domain 1 217 302 - -
Bisa04g0833 614 SMART serkin_6 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0833 614 PANTHER FLIPPASE KINASE 1-RELATED 59 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0833 Bisa-ChrBisa04 19465853 19469040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0833 39 614 AGC Kinase Gene Family AT5G47750 76.897 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa04g0833 Pkinase 1.3e-36 CL0016