Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0812 ATGAGTAATTGTAGTCTTCCATTTTACCAAGGTTTTACTCGCATTTACTACCACCATTCGCCACCGTGTTCACTTTCACCTCATCCCCAACCCTCGCGCCGCAAGTTTTTAACTACGCTCAACCCCAACATGGATGACCTCTTCACCTCCGTCGACGACTTCCCTTACCACGTGGCCCCATTTCCCGACGCCACCGACCTCCTCTTCTCCCAGTCGACGCTTCCGATTCAGCCTCTCGAGGTCGCCGTCCCCTCTCGGAATCCCACCCCGGCACCGCAGAAGCTCCGACCCATCAGGGGCCTCGAACGGTATTCGCCTCCATCGTCGCAGGCCGGCGACAATACTGATAATGGAGGTCTCGCCGTGGCGTCCGGCGATGTGGGGTACCTCTGTAATCAGTCAAGTCGGAATTTTGAGGTTTTGGGTCAGCCGGTGGAAGCTGGCGAGGAGCTGAGGAAGGGGGATCCGGGTTATGTTGCCGGAAGTTCTTGTCTTCCGGCGGAGACTCCGGTAGGTGGCGGGTCGGGTTACATTGGGGATCCGAATGATGAGGGGTGTCAGTTGGAGCAGCAATCTGGATCATCTTGGGACAATGATGACAACTCATTTGGGAGTATGAAAGAACCTGGGAGTGGAAAGAGAAGGAAAAAAACAATTAGAAAGCTCCAAGTTTTTCTAGAAAATTTGGTAAAGAAAGTGATGGAAAAGCAAGAGGAGAGGCATAAACAATTGGTGGACATGATAGAAAAGATGGAACGGGAAAGAATAATGAGAGAAGAAGCTTGGAAGCAGCAGGAAATGGAAAGAATTAAAATGGATGAAGAGGCCAGAGCTCAAGAAAAATCTTATAACCTCACCCTCATATCATTAATTCAGGATCTTTTGGGCCGTGAAATTCAAATCCCCCAACCTGCAGCAAGTGGTGCACGAGAAGACGACGACAGCGAGGCGAACGTCCAAATAGATTTCAAGAGTGATGCGAGTAACAACAGATGGCCAGAAGCTGAAGTACAAGCTCTTATAACTCTAAGAACATCATTAGAACACAAGTTCTGTGTTATGGGATCCAAAGTATCTATATGGGAGGAGATATCTAAAGCCATGCAAAATATGGGCTACAACCGTTCTGCAAAGAAGTGTAAGGAGAAATGGGAAAACATCAACAAGTACTATAAAAGGACTATGGAGAGTGGGAAGAAGCGACGATTAAATAACAAAGCTTGCCCGTACTTTGATGAGTTGGACATTTTGTACCGAAATCGGCTCCTGAATATTGGGAATGCCTTTAGCAACACAGACAATGTTGCCAAGATTGAAAAGGAATAA 1326 0.4766 MSNCSLPFYQGFTRIYYHHSPPCSLSPHPQPSRRKFLTTLNPNMDDLFTSVDDFPYHVAPFPDATDLLFSQSTLPIQPLEVAVPSRNPTPAPQKLRPIRGLERYSPPSSQAGDNTDNGGLAVASGDVGYLCNQSSRNFEVLGQPVEAGEELRKGDPGYVAGSSCLPAETPVGGGSGYIGDPNDEGCQLEQQSGSSWDNDDNSFGSMKEPGSGKRRKKTIRKLQVFLENLVKKVMEKQEERHKQLVDMIEKMERERIMREEAWKQQEMERIKMDEEARAQEKSYNLTLISLIQDLLGREIQIPQPAASGAREDDDSEANVQIDFKSDASNNRWPEAEVQALITLRTSLEHKFCVMGSKVSIWEEISKAMQNMGYNRSAKKCKEKWENINKYYKRTMESGKKRRLNNKACPYFDELDILYRNRLLNIGNAFSNTDNVAKIEKE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0812 441 Pfam Myb/SANT-like DNA-binding domain 330 415 IPR044822 -
Bisa04g0812 441 Gene3D - 332 393 - -
Bisa04g0812 441 MobiDBLite consensus disorder prediction 172 214 - -
Bisa04g0812 441 PANTHER FI21293P1 185 425 - -
Bisa04g0812 441 FunFam Trihelix transcription factor GT-2 332 393 - -
Bisa04g0812 441 Coils Coil 219 254 - -
Bisa04g0812 441 SUPERFAMILY Homeodomain-like 329 400 IPR009057 -
Bisa04g0812 441 CDD GT1 330 394 - -
Bisa04g0812 441 SMART sant 328 390 IPR001005 -
Bisa04g0812 441 MobiDBLite consensus disorder prediction 82 120 - -
Bisa04g0812 441 MobiDBLite consensus disorder prediction 185 205 - -
Bisa04g0812 441 Coils Coil 439 441 - -
Bisa04g0812 441 ProSiteProfiles Myb-like domain profile. 324 388 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0812 Bisa-ChrBisa04 18876154 18878595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0812 211 420 Trihelix Transcription Factor Family AT5G47660 45.133 1.07e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa04g0812 Myb_DNA-bind_4 6.2e-21 CL0123