Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0796 ATGGGTGATCATGAGCTACTCAACAACGTACGACAACTCTTGCTTTCAACTTCAAGAGATCAATCCAATCCCAACAAGAAGATACCAAGTAGAAAGGCGTCCCGGCGCGCCCAAGAAGGTTCGGAAGAAGCAAATAATCAAGGGTTCAAATCAAAGAAAGTAGTCCTACTCTTCTTGGCCTCCTACCTAGGGTTAGGAACCCTATCTTTCTTCCTTATAAGGCACCAACTCAAGGGCATACAAACCAATGGCTTCATTGATGCCGTCTACCTTTGTGTTGTAACTATGACCACAGTAGGGTATGGAGACCTTGTCCCCAACAGCACATTGGCCAAGCTCCTTGCATGCCTCTTTGTCTTCACAGGTGTGGCTCTTGTTGGTATGATCTTGAGCAAAGCAACAGATTACTTTCTTGAGAAGCAAGAAATCCTATTGGTTCGCGCCCTTCACATGGGCGATGACACAGATCCCAACGAGGTTCTTAGGGAGCTTGAGGACTACAAAGTGAGGTACAAGTTCTTGATGGCATCAACTATTCTTGTGGTGCTCATGATTGCAGGAACTGTTGTGTTGTGCTTTGTTGAGGGTTTAGAGTTTGTGGATGCCATCTATTGTGTTTGTTCCACGGTTACTACTTTGGGATATGGCGATAAGAGCTTCTCCACCATGTTTGGTCGTTGTTTTGCTGTTTTCTGGATACTAAGTAGCACTATGTGCTTGGCTCAGTTCTTCATGTATCTGGCTGAACTTAACACTGAAGGTAGACAAAGATCACTCGTGAACAAGGTTCTTACAAGCGAACTTACAAAAGGGGATCTTGAGGCTGCAGATCTTGATAATGACGATGTTGTCAGTCTTGCAGAGTTCACTGTATACAAGTTGAAGGAAATGGGAAAGATCAATCAAGAAGATATTTCGAGTCTGAAGGAGGCTTTTAAAAGACTTGACATTGATAATTCTGGAACTTTGACTGAAGCTGATCTCAAACGTGAAATTAACAATTTAACATCCTATTCCTAA 1020 0.4304 MGDHELLNNVRQLLLSTSRDQSNPNKKIPSRKASRRAQEGSEEANNQGFKSKKVVLLFLASYLGLGTLSFFLIRHQLKGIQTNGFIDAVYLCVVTMTTVGYGDLVPNSTLAKLLACLFVFTGVALVGMILSKATDYFLEKQEILLVRALHMGDDTDPNEVLRELEDYKVRYKFLMASTILVVLMIAGTVVLCFVEGLEFVDAIYCVCSTVTTLGYGDKSFSTMFGRCFAVFWILSSTMCLAQFFMYLAELNTEGRQRSLVNKVLTSELTKGDLEAADLDNDDVVSLAEFTVYKLKEMGKINQEDISSLKEAFKRLDIDNSGTLTEADLKREINNLTSYS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0796 339 ProSiteProfiles EF-hand calcium-binding domain profile. 303 338 IPR002048 GO:0005509
Bisa04g0796 339 SUPERFAMILY Voltage-gated potassium channels 161 251 - -
Bisa04g0796 339 MobiDBLite consensus disorder prediction 18 45 - -
Bisa04g0796 339 SUPERFAMILY EF-hand 261 333 IPR011992 -
Bisa04g0796 339 Gene3D - 157 271 - -
Bisa04g0796 339 Pfam Ion channel 179 250 IPR013099 -
Bisa04g0796 339 Pfam Ion channel 60 137 IPR013099 -
Bisa04g0796 339 ProSitePatterns EF-hand calcium-binding domain. 316 328 IPR018247 -
Bisa04g0796 339 PRINTS Two pore domain K+ channel signature 211 220 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa04g0796 339 PRINTS Two pore domain K+ channel signature 94 122 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa04g0796 339 Gene3D - 273 335 - -
Bisa04g0796 339 Gene3D - 47 143 - -
Bisa04g0796 339 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 60 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa04g0796 339 SUPERFAMILY Voltage-gated potassium channels 55 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0796 Bisa-ChrBisa04 18526394 18529210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0796 55 328 Ion Channels AT5G55630 60.219 2.10e-119 347