Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0767 ATGGCTTTGTTTGACCATCCTTTGATTAACCTTAGTATACAGATCGACGGCGCAGGTGGTGGAGTTTCAGCCTCGGAAGTCTCAGAGAGGTCGCGCAAAACGACGACGGTTCTGCTCAACGCCGACGGGCCCACCTTAAATGATCCTCTTCTCGCTGATGATGACCCTTGTTCTTCTTCAACCTCGCTTCCCCTTCACTCACTTTCCATCTCTCGCCATGAAAATCTCTTGAAGAATATCAATATCAGAGGCTTGAATCGCATCCCTATCTTGCTTGGCTTTGCGAAGATGGTTTCTCTGGAGGATCCTCACTCCACTTCCAATCGTTTCCCTTTATCCCGAAGCTATTACTCTACTACCTCTTCCGCCAACAATTCTTCCTCCAGAATCCACCGACACGTCGGGAGGTCCATGCGAACTATACGCTCTAATTTCTTCCAAGATGACCATAGCTGCTCCTTCACTGCATCTGCCACCGAAAAATCCACGTGCCTGTCGGAAACGATGACTGATTCCGTCATGGACCTCAGGCTCGGCGAGCTCGCATCGAGGAACAACAAATCTGTGAAATCTTCCGCTACGGAGGAGGAGTTCCTTGATCTTTCTCAAGCTTTCAGTGATTTCTCGGCTTGTAGCAGCGATATTTCCGGGGAACTGCAGAGGCTGGCGTGTTTGCCGTCCCCGGAAAATGTGCAGAAGAACGAAGGCGGTGGTGGTGAAGTGGAACAGGAGCCCGAGCCGGAGCCGTGCCTGGGGTTTCTGCAGAGAGAGAATTTTTCTACTGAGATTATTGAGAGTATTTCGCCGGAGGATCTTCAGCCGACTGTGAAGATCTGTATCGACGGGCTGCAGTCACCGTCGGTTGCTGTAAAGCGATCGGCTGCGGCTAAGCTCAGGCTATTGGCCAAGAACCGAGCGGATAACCGAGCTCTGATTGGTGAGTCCGGTGCCGTTCCGGCTTTGGTTCCCTTGCTTCGTTGCAGTGATCCGTGGACACAGGAACACGCTGTCACGGCCTTGCTGAATCTCTCGCTGCACGAGGACAACAAAATGCTGATAACGAATGCAGGGGCTATAAAGTCACTGATTTATGTGCTTAAAACCGGAACGGAGACTTCCAAGCAGAACGCGGCATGTGCACTTCTAAGCCTCGCGTTGGTAGAAGAAAACAAGAGCTCGATTGGAGCTAGTGGGGCTATTCCACCGCTCGTTTCCTTGCTTCTGAATGGTTCTAGCAGAGGAAAGAAGGACGCTCTGACGACACTGTATAAGCTCTGCTCTATAAAGCAGAACAAGGAGAGGGCGGTGAGCGCCGGAGCGGTGAAGCCGCTTGTGGAGATGGTGGCAGAGCAAGGAACTGGTATGGCTGAGAAGGCAATGGTGATACTTAATAGCTTGGCAGGGGTTCCAGAAGGAAAGGAAGCAATTGTAGAAGAAGGTGGACTAGCTGCTCTTGTGGAGGCAATTGAGGATGGGTCTGTGAAGGGAAAGGAATTTGCAGTTTTGACACTTCTGCAGTTATGTGCTGATAGTGTGAGGAATAGAGGATTGCTTGTGAGGGAGGGTGGAATACCCCCACTGGTTGCTCTTTCTCAGACTGGAAGTGTTCGAGCTAAGCACAAGGCTGAAACACTCCTTGGATATTTGAGAGAATCAAGACAAGAAGCATCCACTTCAAGTCCTTAG 1686 0.5077 MALFDHPLINLSIQIDGAGGGVSASEVSERSRKTTTVLLNADGPTLNDPLLADDDPCSSSTSLPLHSLSISRHENLLKNINIRGLNRIPILLGFAKMVSLEDPHSTSNRFPLSRSYYSTTSSANNSSSRIHRHVGRSMRTIRSNFFQDDHSCSFTASATEKSTCLSETMTDSVMDLRLGELASRNNKSVKSSATEEEFLDLSQAFSDFSACSSDISGELQRLACLPSPENVQKNEGGGGEVEQEPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDGLQSPSVAVKRSAAAKLRLLAKNRADNRALIGESGAVPALVPLLRCSDPWTQEHAVTALLNLSLHEDNKMLITNAGAIKSLIYVLKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLLNGSSRGKKDALTTLYKLCSIKQNKERAVSAGAVKPLVEMVAEQGTGMAEKAMVILNSLAGVPEGKEAIVEEGGLAALVEAIEDGSVKGKEFAVLTLLQLCADSVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLRESRQEASTSSP 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0767 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 316 358 IPR000225 GO:0005515
Bisa04g0767 561 SUPERFAMILY ARM repeat 273 550 IPR016024 -
Bisa04g0767 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 439 481 IPR000225 GO:0005515
Bisa04g0767 561 PANTHER U BOX DOMAIN-CONTAINING 180 549 - -
Bisa04g0767 561 FunFam U-box domain-containing protein 4 415 556 - -
Bisa04g0767 561 FunFam U-box domain-containing protein 4 262 414 - -
Bisa04g0767 561 Gene3D - 420 560 IPR011989 -
Bisa04g0767 561 SMART arm_5 305 345 IPR000225 GO:0005515
Bisa04g0767 561 SMART arm_5 346 386 IPR000225 GO:0005515
Bisa04g0767 561 SMART arm_5 469 509 IPR000225 GO:0005515
Bisa04g0767 561 SMART arm_5 387 427 IPR000225 GO:0005515
Bisa04g0767 561 SMART arm_5 511 551 IPR000225 GO:0005515
Bisa04g0767 561 Pfam Armadillo/beta-catenin-like repeat 307 344 IPR000225 GO:0005515
Bisa04g0767 561 Pfam Armadillo/beta-catenin-like repeat 389 427 IPR000225 GO:0005515
Bisa04g0767 561 Gene3D - 257 419 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0767 Bisa-ChrBisa04 17626559 17630039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0767 7 554 U-box Gene Family AT2G23140 36.185 1.60e-80 263