Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0752 ATGCTAAATCTGGTTGCAGCTGAAGAGTTGATTCAAATTCAAAAAGTGAAAGTGATCATAGGGATGCATACATGGCAAGAAGCAGCTGTAGTGGCTAGAGTTGGAAGCCAAGTTCAAGTTCCAATCATATCCTTTGCATCACCTACAGGCTGTAATTACCCCTCCATTGACACCAAACCGCTGGCCTTTTCTGGTAAGACTATCCAACAATATCACTGCATACATAAACTGCATTGCAGACATAGTGCATTCTTTTACTTGGCAAAGAGCAATAGCCATTATGAAGATGATGGCATTGGTGGTGGTGGAGAAAACGGGATGCTATCACTCCTCTCTGAGATTGAATCTAGTACAATGGCCTGGGGATTTGAAGAGGATTCCAAAAGGCAGGAACATGCCCCTGTTAAACAAAAGCCAATGAGAATTGCAGTTCTAGGGAGAACATCGTTTTCCAAGTTTGTCAAGGTTGACTATGGAAAGAAACAACATAAATATAGTGCCTTATGTATTGAAATTTTTGAAAAGGTGCTTAAACTTTTGGAGTATGAATTGCCCTATGAGTTTGATCCGCTCAATGTAACAACTTATCCTCACCTGGTTCAACTTGTTTTTAAGTTTCGTTGGTACCTTGAGAAGGTGCCCAATCCAGAGTTTCATGGCAGTTGGAAGAGCCAAATTAGCATTGCTCTTTGGTTTACCTTCTCCTCTGTATTCTTTGCTCACAGGGAGAAAATGCACAACAATTTATCTCGGGTGGTGATGGTTTCATGGCTCTTTCTAGTTATGATTCTGAACTCAAGCTACATTGCTAGCCTTTCTTCAATGCTAATAGTTCAACAATTTCAGCCAAGTGTCACAAGCATTGAGTGGCTCAGGAAAATTAACATGAAAATAAGCTATGATGATGACTCATTTATTTGGACGTACCTAGTAAATATCAAAAAGTTCCAGCCAAAAAACATCATAAAGATTAGCAGTGAATATAGTTATGATGACGAGTTCAAAAACAACTCAATAGCAGCTGCTTTTCTTGAGCTTCCTTATGAAAAAGTATACATTAGTACATATTTGGAGGTTGCGAAATGGTGGTTGCAACGTCGATTAGGGATTGAATGGCAGAGGATAGGGGAGTGGGTGAGTAATGATGGAGACAGTGAGGGGACGGCAGTGATAGTAAGACGAAGAACGATTTCCAAAAAGGCTCTCCAGTGGCTAAAGATGTTTCCAAAGGCTATATTGCAACTGTCAGAAATTGGAGAACTGAAGAACTCGGAAGCTTCTGTCAACCACCTCAAAGTGAAGCTCAAGGAGGTGATGTCTCCAGAAGTGATGAGAGTGTTTGGAGAAGAGCTCTTGAATTAG 1362 0.4053 MLNLVAAEELIQIQKVKVIIGMHTWQEAAVVARVGSQVQVPIISFASPTGCNYPSIDTKPLAFSGKTIQQYHCIHKLHCRHSAFFYLAKSNSHYEDDGIGGGGENGMLSLLSEIESSTMAWGFEEDSKRQEHAPVKQKPMRIAVLGRTSFSKFVKVDYGKKQHKYSALCIEIFEKVLKLLEYELPYEFDPLNVTTYPHLVQLVFKFRWYLEKVPNPEFHGSWKSQISIALWFTFSSVFFAHREKMHNNLSRVVMVSWLFLVMILNSSYIASLSSMLIVQQFQPSVTSIEWLRKINMKISYDDDSFIWTYLVNIKKFQPKNIIKISSEYSYDDEFKNNSIAAAFLELPYEKVYISTYLEVAKWWLQRRLGIEWQRIGEWVSNDGDSEGTAVIVRRRTISKKALQWLKMFPKAILQLSEIGELKNSEASVNHLKVKLKEVMSPEVMRVFGEELLN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0752 453 Gene3D - 191 318 - -
Bisa04g0752 453 Pfam Ligand-gated ion channel 210 295 IPR001320 GO:0015276|GO:0016020
Bisa04g0752 453 FunFam Glutamate receptor 188 319 - -
Bisa04g0752 453 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 207 425 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0752 Bisa-ChrBisa04 17138225 17144925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0752 208 422 Ion Channels AT2G17260 33.488 2.51e-26 110