Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0717 ATGATGACGACGACGATGCAAGAAACGAAGCTCGAACCGAAGCTGATGAGCCAAAAGCCTCTCTCTCTCCCTCTCTGTAATCAAGACCCTGTTACTTTTGAACCAAGCATTCACGAGACACCCCTGAGTTTTCCGCCTTTGAAATCCATCTTTTTGCTGCTAAACGACCTACTCCTCCTTTCTCATCCTCATCGCGAGGAAAAAAACCGTGAAAATCTCCGTCTTCTTCCTTTCTTTCTCAGCCATAACAATGAAATCTCGCTTCCTTACCATTCAGTTCGAGGGTTCGTTAAGTTCAGACTTCAGAGACCTTTTGATTCAATGGCGGGGTCGTGCTTCCACGCGCTTCGCCGGCGAAAGTCGAAGAGTAAACCGCTCCCGGAGCCGTCTTCGTCGTCAAGGCCGAGGCCAAATGCTGACATGGAGAATATGGAAAGGAGGAGGTTCGATAGCTTGGAATCGTGGTCGATGATATTGGACTCCGAGAATGTGGAGACGTGGGAGGCGTCTAAGGAGGATCAGCAGGAGGAGTGGAACGCTGATCTTTCTCAGCTTTTTATAGGGAACAAGTTCGCTTCTGGTGCTTATAGTCGGATTTATCGTGGGATTTACAAGCAGAGAGCCGTGGCTGTGAAAATGGTGAGGGTTCCGATACAGGACGAGGATAAAAGAGACGTGCTAGAGCAGCAATTCAAGTCCGAAGTGGCCTTACTTTCACGTCTCTTTCATCCTAACATAGTGCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAGTACATGTCACAAGGAAACCTGAGGATGTATCTGAACAAGAAAGAGCCGTACTCTTTATCTACAGAAACAATACTGAGATTAGCTCTTGACATATCCAGGGGTATGGAGTACCTTCATTCACAGGGTGTGATTCACAGAGATTTGAAGTCAAATAACTTGCTCCTCAATGATGAGATGAGGGTTAAGGTGGCAGATTTTGGCACATCATGTCTTGAAACACGATGTCGAGAGACCAAAGGAAACATGGGAACATATCGTTGGATGGCACCGGAGATGATTAAGGGAAAACCTTACACTCGGAAAGTTGATGTTTATAGTTTTGGAATTGTTCTTTGGGAGCTCACAACCTCTCTGCTTCCCTTCCAAGGCATGACCCCTGTGCAAGCTGCTTTTGCTGTGGCTGACAAGAACGAAAGGCCTCCACTTCCAGCTAGCTGTCAGCCAGCACTAGCACATCTAATAAAGCGATGCTGGTCAGCAAACCCTGCAAAGCGACCAGATTTCAGCGACATTGTGTCTGCTTTGGAGAAGTACGATGAGTGTGTGAAGGAGGGCCTACCCCTCACTCATCATTCTGGTCTAGTCACTCGTAACGCCATTATTGAACGGTTAAAAGGTTGTGCTTCCATCATCTCCTCCTCCATACCTGTACATGCCTGA 1452 0.4697 MMTTTMQETKLEPKLMSQKPLSLPLCNQDPVTFEPSIHETPLSFPPLKSIFLLLNDLLLLSHPHREEKNRENLRLLPFFLSHNNEISLPYHSVRGFVKFRLQRPFDSMAGSCFHALRRRKSKSKPLPEPSSSSRPRPNADMENMERRRFDSLESWSMILDSENVETWEASKEDQQEEWNADLSQLFIGNKFASGAYSRIYRGIYKQRAVAVKMVRVPIQDEDKRDVLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKGKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVADKNERPPLPASCQPALAHLIKRCWSANPAKRPDFSDIVSALEKYDECVKEGLPLTHHSGLVTRNAIIERLKGCASIISSSIPVHA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0717 483 SMART serkin_6 185 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0717 483 SUPERFAMILY Protein kinase-like (PK-like) 165 439 IPR011009 -
Bisa04g0717 483 FunFam serine/threonine-protein kinase HT1 268 461 - -
Bisa04g0717 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Bisa04g0717 483 PRINTS Tyrosine kinase catalytic domain signature 410 432 IPR001245 GO:0004672|GO:0006468
Bisa04g0717 483 PRINTS Tyrosine kinase catalytic domain signature 347 357 IPR001245 GO:0004672|GO:0006468
Bisa04g0717 483 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672|GO:0006468
Bisa04g0717 483 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672|GO:0006468
Bisa04g0717 483 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672|GO:0006468
Bisa04g0717 483 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 151 442 - -
Bisa04g0717 483 FunFam Serine/threonine-protein kinase isoform 1 175 267 - -
Bisa04g0717 483 CDD STKc_MAP3K-like 192 439 - -
Bisa04g0717 483 MobiDBLite consensus disorder prediction 118 142 - -
Bisa04g0717 483 ProSiteProfiles Protein kinase domain profile. 185 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0717 483 Pfam Protein tyrosine and serine/threonine kinase 187 439 IPR001245 GO:0004672|GO:0006468
Bisa04g0717 483 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
Bisa04g0717 483 Gene3D Transferase(Phosphotransferase) domain 1 268 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0717 Bisa-ChrBisa04 16427361 16432306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0717 108 473 MAP Kinase Kinase Kinase AT1G62400 81.383 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa04g0717 PK_Tyr_Ser-Thr 5.4e-67 CL0016