Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0711 ATGGGGAAGTCCGGGGGTAGAAAAAAGAAGGGTGGTTCAAACCAAGCTACAGTTGAGAATTCAGCTCCAAGTGCTAATGGTGGTGTAGATTTGGACTCTTCAATTTTTTTGAAGAGGGCCCATGAGCTCAAGGAGGAAGGAAATAAGAGATTTCAGAATAAGGACTATGCTGGTGCTCTTGAACAGTATGAGAATGCTCTTCGACTAACCCCCAAGACCCACCCTGATAGAGCGGTCTTTCACAGCAATAGAGCTGCATGCTTGATGCAAATGAAGCCCATAGATTATGAAACTGTGGTTGCTGAGTGCACCATGGCCCTACAGGTCCAGCCCCAATTTGTCCGGGCGCTTCTTCGGAGGGCTCGAGCATATGAGGCTACAAGGAAGTATGAAATGGCCATGCAGGATGTACAAGTCTTATTGGGAGCTGACCCTAACCATCGGGATGCTTTGGAGATTGCCCAGAGACTGAGGACTGCATTGGGACCTCGCCAAGAAGCCCAGCAGGATCTCCAGAGTCGCCCATCCCCTGCTGCTCTTGGTGCTTCTGCGGTCCGTGGTGCACCTATTGCTGGTTTAGGGCCATGTTTACCGGCCAGGCCAGTACCAAAGAAGGTGGCAAACTCTGCAGCTGGAATGGCTGCCGCACTTAACAATAAGCCAGAGAAGTCCCAACCAACTTTAGTTACTGAAAATGGTCCTGAGACGAAGTCCCAAATGCCAAAACTTGTATTAAAGCCTTCAAATGGTTTGGCAAGATCACCTAATACAGGAAAAGAGTACCAGAAGCAGCTTTCATCTTATTTATCAACTGCTCATGGACAGCATTCAGATGTTGCTATTCAGTGGAGGCCATTGAAACTTGTTTATGATCATGACATTAGGCTTGCCCAGATGCCAGTCAATTGCGGTTTTAGAGTACTAAGAGATTTAGTGAGCAAACGGTTTCCATCGTCAAAGTCAGTTCTGATCAAGTATAAGGATAGTGATGGTGATTTGGTGACTATAACATCTACTGATGAACTCAGATTGGCAGAGTCTTCTGCTGATAGCCATCTTACAAAAGAACCTGAAGCAGAGAAAAGTGATTCATTTGGTATGTTGAGACTTCATATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTATACCAGAAGAAGAGGAAGTAAAACCTGTTGAGAGTGAAGTACTGGAGGGAGATGAGAGTGGGTCGCATACTTCCCTCAGTGAATCTGTCTCAAAAGCTCCTGATACTGAGATTGACAAGATAGGGAAAGAAGCTCCAAAGGAGAAACCAGCAGCTACAGAAGATGCTGAATGCAAGGAAGTGGAAATGGATGATTGGTTATTTGAGTTTGCTCAGCTTTTCCGCTCTCACGTTGGTATTGATCCAGATGCTCATATTGATTTGCACGAGCTTGGGATGGAACTCTGTTCAGAGGCACTTGAGGAAACAGTAACCAGTGAGGAGGCTCAAGATCTCTTTGACAAGGCTGCTTCAAAGTTCCAGGAGGTAGCTGCTTTGGCATTCTTCAATTGGGGAAACATTCACATGTGTGCGGCTAGAAAGCGAATTCCTTTAGATGAGTCAGGTGAAAAGGATGTCGTGGCAGAACACCTTCAAGTAGCTTATGACTGGGTCAAGAACAAGTATTCTTTGGCAAGAGAGAAGTATGAGGAAGCACTCTTGATAAAACCAGACTTTTATGAGGGATTGTTGGCTCTGGGACAGCAACAATTTGAAATGGCCAAACTTAATTGGTCATTTGCGCTTGCTAAGAAGATTGATCTATCAGGCTGGGATTCTTCCGAGACACTTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGTTGCAACTGATATGTGGGAAAAGCTGGAGGAACAGAGGGCGAATGAACTAAAGGACCCGAATGCAAGCAAGAAAGAAGAACTACTAAGAAGAAGAAAAAAACAGTTAGGTGCTGCTGAAGGTGAGACCTCCACTGCTGGTGGTCAGGGTGATTTATCTGCAGAAGAAGCTGCAGAGCAAGCAGCTGTCATGAGGTCACAGATCCACCTCTTCTGGGGTAACATGCTTTTCGAACGATCCCAAGTTGAATGTAAATTAGGGATGGGTGGTTGGAAGAAAAATCTGGATACTGCCGTAGAGCGTTTTAAGCTTGCAGGAGCTTCTGAAGCCGACATTTCATTGGTTCTAAAGAATCATTGCTCTAATGGAGATGCAAAGGAAGCAGGTGAGAAAAGGATTCAGAACCCTCAGCCCAATAAGAGCGGTGATAAAAAGAGTAATGGAGCTACTCAAGAGTGA 2310 0.4541 MGKSGGRKKKGGSNQATVENSAPSANGGVDLDSSIFLKRAHELKEEGNKRFQNKDYAGALEQYENALRLTPKTHPDRAVFHSNRAACLMQMKPIDYETVVAECTMALQVQPQFVRALLRRARAYEATRKYEMAMQDVQVLLGADPNHRDALEIAQRLRTALGPRQEAQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVPKKVANSAAGMAAALNNKPEKSQPTLVTENGPETKSQMPKLVLKPSNGLARSPNTGKEYQKQLSSYLSTAHGQHSDVAIQWRPLKLVYDHDIRLAQMPVNCGFRVLRDLVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESSADSHLTKEPEAEKSDSFGMLRLHIVEVSPEQEPPIPEEEEVKPVESEVLEGDESGSHTSLSESVSKAPDTEIDKIGKEAPKEKPAATEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGEKDVVAEHLQVAYDWVKNKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKIDLSGWDSSETLQLFDSAEEKMKVATDMWEKLEEQRANELKDPNASKKEELLRRRKKQLGAAEGETSTAGGQGDLSAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKKNLDTAVERFKLAGASEADISLVLKNHCSNGDAKEAGEKRIQNPQPNKSGDKKSNGATQE 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0711 769 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Bisa04g0711 769 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Bisa04g0711 769 MobiDBLite consensus disorder prediction 739 769 - -
Bisa04g0711 769 SUPERFAMILY TPR-like 489 586 IPR011990 GO:0005515
Bisa04g0711 769 SMART PB1_new 283 375 IPR000270 GO:0005515
Bisa04g0711 769 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
Bisa04g0711 769 Gene3D Tetratricopeptide repeat domain 37 169 IPR011990 GO:0005515
Bisa04g0711 769 SMART tpr_5 114 147 IPR019734 GO:0005515
Bisa04g0711 769 SMART tpr_5 78 113 IPR019734 GO:0005515
Bisa04g0711 769 SMART tpr_5 40 73 IPR019734 GO:0005515
Bisa04g0711 769 MobiDBLite consensus disorder prediction 375 418 - -
Bisa04g0711 769 MobiDBLite consensus disorder prediction 629 671 - -
Bisa04g0711 769 MobiDBLite consensus disorder prediction 216 259 - -
Bisa04g0711 769 SUPERFAMILY CAD & PB1 domains 281 352 - -
Bisa04g0711 769 CDD PB1 286 355 - -
Bisa04g0711 769 Coils Coil 609 629 - -
Bisa04g0711 769 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Bisa04g0711 769 PANTHER PROTEIN CLMP1 1 753 IPR044517 -
Bisa04g0711 769 Gene3D - 285 355 - -
Bisa04g0711 769 MobiDBLite consensus disorder prediction 10 28 - -
Bisa04g0711 769 MobiDBLite consensus disorder prediction 383 400 - -
Bisa04g0711 769 SUPERFAMILY TPR-like 37 171 IPR011990 GO:0005515
Bisa04g0711 769 MobiDBLite consensus disorder prediction 629 655 - -
Bisa04g0711 769 MobiDBLite consensus disorder prediction 1 30 - -
Bisa04g0711 769 MobiDBLite consensus disorder prediction 220 237 - -
Bisa04g0711 769 MobiDBLite consensus disorder prediction 751 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0711 Bisa-ChrBisa04 16291869 16294178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0711 30 161 Calmodulin-binding Proteins AT3G25230 28.671 1.79e-10 62.4