Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0709 ATGACTTCAAAATTCACTCACAAAGTGTTAAAAGGCCTCATACGCCAAGGTCTATTGCAGAGTAAATCAGCAGTAAAGATCCCAGCATTAAGCAGTTGGTGTTCGTCAGTGAAGCCGTCTACAAGAAGTGATCTCTCCAGAAAGAACTTGTTGAGTGCATCACTTTCACAGCAATTGAGATACCTCAGAAGGCCCACAAAAAACTTGAAGAAGCTCAAGTCATTAATGGAGGAGCTAGATGCTAGGAAGGTAGATGTGAGTACCAAACTACAGCAAATGTGGCTTTGGAAAGGGATGAATCCAAAGGCATTAGTAGAATTATGGCTGAAAAATGTTGAAAGCTTTTCAAGTGAAGCCAGTGTACTCATAAGGGAAAATGAGCAAAGTGGAATATCAGGTGGTTTTTTTTCACCATGTTGTGTTTATTCAAGAATAAAGTTGGGAAAACTCATTGAGAAAAAGATCTTGGAGGCGAGGGAGCTTCTGGAGAAAGGTCAATTCGCAGATGATTCAATGGTTGAAACTTCACCCAGAAAAGGGCAAAGTCTTCCCACAACAAAGTTGATGGAACACAGATCAACCATGAAAGTTTTAAGTAGGGTTTGGCAGTTGTTGTTCAGCAAGAGAGAGAGAAAAATCGGTATTTATGGGATGGGAGGTGTGGGGAAGACAACAATCTTGATTGAGATTAACAACCTTCTGTTGAAAGAGGATAGTCTTTTTGATTATGTTATATGGATTAGTTCTCCAAAGGAAACTGCAAACCCTGAGAAATTGCAGAATGCTATTGCTGAGAAGTTTGATTTGGATCTTTCAAGGTTTCAAGATGAGACTACAAGAGCAGCTTCACTGTTTGAAGCGTTCCAAAGAAGGAGGAGATTTGCTTTGATTCTTGATGACTTATGGGAGCCATTCTCTCTTGAAAGAGTTGGAATACCAACACCAACCATGGAGAATGGCTCCAAATTATTGATAAGCACCAGACGATTGAGTGTTTGCAGAGGCATGGAGACAGATAAGGAAATGGAAATGAAGGTTCTTGATGAGAATGAAGCATGGGATCTCTTCAGAAACAAAGTGGGAGATGAAACATTGGCTTCTCCAGATATAGAGAGAATTGCAAGAGATGTGGCAAAAGAGTGTCGGGGTTTGCCTCTTGGGATTGTCACAGTGGGTAGGGCTTTGAGAAATGAAACTGATGTTTCAGAATGGGAGATTGCTTTGTTAGGGCTGAAAGCTTCATCAGTCCACATAGAACAAATGGAAGAATTGGTTTTCTCCCAAGAAAAAGTGAAGGACTGTGTGAGAATGCATGATTTGATCAGAGATATGGCCATTAGAATCATGAGAACAGATCCTAATTGGCACTGTATTGTAAAAGCAGGAAATGGGTTGACAAAACCCCCACAAATCAATGAATGGATGGAAGATGTTCAAAGGGTGTCACTAATGAAAAATGACTTGAGAAGCATTTTCCTTGGCAATCCTCCACCATGTCCACAAGCAACTTCCTTGTTACTGCAATACAATTCTTTCCCTCAAAACATACCTCATGATTTCTTTGATTTCTTACAAAGCCTAAAGGTTCTTGACCTCTCCTACACCGGGATTGATTCACTTCCTGGATCAGTCTCTAACTTGGAGAACCTTTGTGCCTTGTTACTGAGCAATTGCTGGAATTTAAGTGTAGTCCCTTCTTTAGCGAAACTCATTAAGCTGATGACACTGGACCTTTCTTGTTGCTGGAAGATCAAACAACTTCCTCATGGAACAGAACAACTAGGCAACCTTAGACGTCTAAATATCTCGAATACTATGATTAGAAGCTTGCCATCTGGGTTTATCTCAGCATTAAATCTTCTAGAAGAGTTGTTGATGTGCAATGCTCTCGAGTTTAAAATACCATTGCCACCAACAAGTGCTGAAATTAGCATTGATGAATTCATATCCTCCTCAAGTCTGTCTTCTCTTGAAGTGGACTTCTGGAGTTTGGATCTCTATGATGCATACACTAGATCTGGTCACTGGGTTCAGTTAGATAAGTTCAAGTTCAATGTCGGACCTGGAGATATCCAAGTAGTTTCAGAGAGAAGAAGCATAACATTTCTGGGGATACACATTGAGCAGGGAAGTCCCATTTTGATCCCAGAAAGTACTCTTGAATTGATTTTTTCTGATTGCCATGATCTTACAGGGCTAACTACCAGCCTTGTTAATGTAGAAAAGCTCAGAAAATGCACAGTCGTATGCTGTTACTGTATCGAAAACATTGTTGATCCCGGACAAAACGATTTGTCTATGCTGGAGACAATGGTTCTAGGGTTTTTGATGAATTTAAGGATGATTTGTAGGAAAGTAGTCACAGCAAGTACTCTCATAAACCTGAAGATTATCACAGTAGAATACTGTCCAAGTTTGAAGAATCTATTCCAGGGGCCCATCTTGCTGCAACTTCTAAACCTTGAAGAAATCAGAGTAGGCCATTGTGAAAGTATGGAGAAATTGGTCAGATGGGAAGATGATAATGAAGAAGAAGACAATATTCTTCATGCAGACAAAATCCAATTGCCAAAACTACAGAAGTTGAGGTTGGAAGTCGTGCCTAAACTAAAAGAGATATACGGTGGACTCATCAATTTTGGTTCTTTATGCTGTGTTCAAGTCATTTCTTGTGATGCTCTCAAGAGGCTACCCTTTGATCTTGAAGATGTAATCTGCAATTCTTTAGAAATCAAAGGATCAAAATATTGGTGGGAGTCACTTGAATGGGATGAACCCTCTGTCAAGCAAATAATGGAAACTTATTTCATAGAACTGCCAATAATGGAGTCAGCTCATGTTGCTAGCAGTGGCAGCCAAGTAGGTGTGGCTCATACATAG 2880 0.4007 MTSKFTHKVLKGLIRQGLLQSKSAVKIPALSSWCSSVKPSTRSDLSRKNLLSASLSQQLRYLRRPTKNLKKLKSLMEELDARKVDVSTKLQQMWLWKGMNPKALVELWLKNVESFSSEASVLIRENEQSGISGGFFSPCCVYSRIKLGKLIEKKILEARELLEKGQFADDSMVETSPRKGQSLPTTKLMEHRSTMKVLSRVWQLLFSKRERKIGIYGMGGVGKTTILIEINNLLLKEDSLFDYVIWISSPKETANPEKLQNAIAEKFDLDLSRFQDETTRAASLFEAFQRRRRFALILDDLWEPFSLERVGIPTPTMENGSKLLISTRRLSVCRGMETDKEMEMKVLDENEAWDLFRNKVGDETLASPDIERIARDVAKECRGLPLGIVTVGRALRNETDVSEWEIALLGLKASSVHIEQMEELVFSQEKVKDCVRMHDLIRDMAIRIMRTDPNWHCIVKAGNGLTKPPQINEWMEDVQRVSLMKNDLRSIFLGNPPPCPQATSLLLQYNSFPQNIPHDFFDFLQSLKVLDLSYTGIDSLPGSVSNLENLCALLLSNCWNLSVVPSLAKLIKLMTLDLSCCWKIKQLPHGTEQLGNLRRLNISNTMIRSLPSGFISALNLLEELLMCNALEFKIPLPPTSAEISIDEFISSSSLSSLEVDFWSLDLYDAYTRSGHWVQLDKFKFNVGPGDIQVVSERRSITFLGIHIEQGSPILIPESTLELIFSDCHDLTGLTTSLVNVEKLRKCTVVCCYCIENIVDPGQNDLSMLETMVLGFLMNLRMICRKVVTASTLINLKIITVEYCPSLKNLFQGPILLQLLNLEEIRVGHCESMEKLVRWEDDNEEEDNILHADKIQLPKLQKLRLEVVPKLKEIYGGLINFGSLCCVQVISCDALKRLPFDLEDVICNSLEIKGSKYWWESLEWDEPSVKQIMETYFIELPIMESAHVASSGSQVGVAHT 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0709 959 Coils Coil 69 89 - -
Bisa04g0709 959 Gene3D - 347 428 IPR042197 -
Bisa04g0709 959 SMART LRR_typ_2 524 547 IPR003591 -
Bisa04g0709 959 SMART LRR_typ_2 594 617 IPR003591 -
Bisa04g0709 959 Pfam NB-ARC domain 197 420 IPR002182 GO:0043531
Bisa04g0709 959 SUPERFAMILY L domain-like 434 910 - -
Bisa04g0709 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 414 IPR027417 -
Bisa04g0709 959 Pfam Leucine rich repeat 501 558 IPR001611 GO:0005515
Bisa04g0709 959 Gene3D Ribonuclease Inhibitor 718 910 IPR032675 -
Bisa04g0709 959 Gene3D - 179 346 IPR027417 -
Bisa04g0709 959 Gene3D Ribonuclease Inhibitor 443 685 IPR032675 -
Bisa04g0709 959 FunFam Probable disease resistance protein At1g61300 180 341 - -
Bisa04g0709 959 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 60 898 - -
Bisa04g0709 959 FunFam Probable disease resistance protein At5g66910 346 431 - -
Bisa04g0709 959 PRINTS Disease resistance protein signature 381 395 - -
Bisa04g0709 959 PRINTS Disease resistance protein signature 288 302 - -
Bisa04g0709 959 PRINTS Disease resistance protein signature 568 584 - -
Bisa04g0709 959 PRINTS Disease resistance protein signature 212 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0709 Bisa-ChrBisa04 16222562 16227844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0709 211 605 WRKY Transcription Factor Family AT5G45050 21.333 6.20e-11 64.7