Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0703 ATGAGTCAACTCGGTGTGATATTGCAGGAATCGCTCGGAACAGAGAGGGAAAGACGAACGATTCTGGGTTTGTTGACGGAGCAAATGGAAGCCGTTGATAATAGAGAGCCTCGGAGGAGGAGGAGTTTAAAAGAACGGCTGAGATTTACCGGAATGGGGTGTTGCGGCGCCACCTGGGGTTTCCGGCCGACCGCCGAGCGGCACGGAGGAGAAATAGAAAACGACGACGACGAGGACGAACGGCGGCAGCAGCAACGGCGGCTCCGTGCAAATCCAGGTCAAGGATCGAGTTCATCGGACCCGGACTGCGTGGCTCCGATCTCGGCGGGATCGGGGATGAATCTTGCCGCGGCGCTGGCTGCGGAGCGGCAATTCCGTGGGGCGCAGGAAGCGGAGGAGGGGAGTGAGGGATCCGGCGGAGGTGGAAGGAGGACGACGGCGTCAGCTGCTCCGGAGACGCCGTGGAGGGTGTCGCTGATGAGGCTTCTGGAGGAGACGGAGGGCGGTGGCGACAGCGAAGTGAGGCCGACGGCGACGGAGACGGAGAAAGGAGGGGTGGGGAATGATACGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGTGCGGCATTTATCCCATGTGGTCACACTTTTTGCAGGGTGTGCTCCAGAGAGCTGTGGCTGAACCGAGGGACCTGTCCCCTCTGCAACCGTTCGATCCTCGAGATTCTTGACATTTTCTGA 723 0.603 MSQLGVILQESLGTERERRTILGLLTEQMEAVDNREPRRRRSLKERLRFTGMGCCGATWGFRPTAERHGGEIENDDDEDERRQQQRRLRANPGQGSSSSDPDCVAPISAGSGMNLAAALAAERQFRGAQEAEEGSEGSGGGGRRTTASAAPETPWRVSLMRLLEETEGGGDSEVRPTATETEKGGVGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0703 240 MobiDBLite consensus disorder prediction 58 108 - -
Bisa04g0703 240 ProSiteProfiles Zinc finger RING-type profile. 192 230 IPR001841 -
Bisa04g0703 240 PANTHER OS01G0917900 PROTEIN 5 240 - -
Bisa04g0703 240 Pfam Zinc finger, C3HC4 type (RING finger) 189 234 - -
Bisa04g0703 240 CDD RING-HC 192 229 - -
Bisa04g0703 240 MobiDBLite consensus disorder prediction 124 151 - -
Bisa04g0703 240 MobiDBLite consensus disorder prediction 88 104 - -
Bisa04g0703 240 MobiDBLite consensus disorder prediction 66 87 - -
Bisa04g0703 240 SMART ring_2 192 229 IPR001841 -
Bisa04g0703 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 169 240 IPR013083 -
Bisa04g0703 240 SUPERFAMILY RING/U-box 186 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0703 Bisa-ChrBisa04 16084029 16084751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0703 21 240 C3H Transcription Factor Family AT4G22250 51.570 4.83e-60 187