Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0681 ATGGCTGAGACCCGCTTGGCCTTTTCTCTTCTTGTCACTGAGTTTATGTCAATCGCTTTCATCTTTGCTTTGCTCCCTCTTGCTGTAACCCTCACTGACCCTTATGATGTTCAAACACTTAAAATTATGTACATCACATTGAATAGTCCCCCTCAGCTAACGGGTTGGAAAATCATCGGCGGTGATCCATGCAGAGAGTCATGGGAAGGGATTGGATGTGAAGGTTCATCCGTTGTTTCCATTGAGCTCTCAGGTTTAGGACTCAATGGGACAATGGGATACCTGCTTTCAAACCTCATTTCACTGAGGGAGCTGAATCTTGCAAGAAATAACTTAAGCGGAAATCTTCCTTACTCCATTTCCGCCATGATCTTCCTCAGTTACCTGAATGTAAGCCATAATGCACTGACCCTGACAACTGGAGAAGCTTTTTCTAATCTTGCTGATCTTGGTACCTTGGATCTATCATTCAATAACTTCTCTGGTGATCTTCCTAGTTCATTTAGTTCATTGTCCAATCTTTCTTCTCTTTTCTTGCAGAACAATCAATTGACTGGTTCTCTTGATGCTCTTGTTGGTTTGCATTTGAATACGTTATATCATGGAAATTCTTTTGACAATGGGGCTGCTCCTTCTCTGCCACCACGCACATGTCCTTCACCCTTTCATAATAATGATCACCATTCTGGATCTGATAGTGAATATACTGATGGTAATAAGGGTTTGACAACTGGGGATATTGTGGGCATCATATTGGCATTGGTGTTTCTGGCTGTTATGCTACTTGTTCTTGTTCTTTGTATTCGAAAGCAACAACGGCAGGAAAAACATGCAAAAACTTCTGATGGGAGTCTTCCTCTTGGAACTAATAATGAACATGGGATAGAAAGTGATGATGATACTCCAAATCTCGAGCCTCCTCCTGCAGAAGAAGTGATGAAATCCCCCATAACTGCAACATCATACACTGTTGCTTCTCTCCAAAGTGCAACAAATCGCTTTAGTCGAGAGTTTCTTATAGGCGAAGGGTCTTTTGGTCGAGTTTACAAGGCTGAATTTCCTAACGGGAAGTTGTTCTCAACTTTTTACTGGATCATGGTCATTAAGAAAATCGACAATGCTGCACTGTCACTACAAGAGGAAGACAGCTTTCTCGAAGCTGTTTCGATTATGTCACGCTTGCGGCATCCAAATATTGTTAGCCTAACTGGATATTGTGCACAGTACGGGCAACGTATTCTAGTTTATGAGTATGTAGGACATGGAAATTTACACAATATGCTCCATGTTGCTGACTATTGCAGTAAGGCTTTATCATGGAATGCTCGTGTCCGGATAGCACTTGGCATGGCCCGAGCTTTGGAGTACTTGCATGAAGTATGCTTGCCCTCTATTGTACATAAAAACTTCAAATCAGCAAATATATTACTTGATGAGGAGCTCAATCCTTACCTCTCTGACTGTGGTTTAGCTTCTCTAATGCCAAATGCTATGATGCATCTCTTAGTTTCGACTGAGATGGCTGGTTCATTTGGTTATTGCGCCCCTGAGTTTGCATTGTCAGGAACATATACAGAAAAAAGTGATGTTTACAGCTTTGGAGTGGTCTTGTTGGAGCTATTGACTGGCCGGAAGCCGCTTGGCAGTTCACGGGTCAGATCGGAGCAGTCGCTTGTGAGGTGGGCTACTCCTCAGCTTTGCGATATAGATGCCTTGACCAAAATAGTTGATCCTGCTATGAATGGCATGTATCCTGCAAAGTCACTTTCTTGCTTTGCTGATACTATTGCCCTGTGTGTTCAGCCGGAGCCGGAATTCCGACCTTCCATGTCAGAGGTAGTGCAAGCATTGGCCCGGTTGGTGCAAAGAGCGAGTGTGGCTAGAAGGGGTTCCAGTGATGGCTCCAGTTTTGGTGGTCACAGACCCTAG 1929 0.4355 MAETRLAFSLLVTEFMSIAFIFALLPLAVTLTDPYDVQTLKIMYITLNSPPQLTGWKIIGGDPCRESWEGIGCEGSSVVSIELSGLGLNGTMGYLLSNLISLRELNLARNNLSGNLPYSISAMIFLSYLNVSHNALTLTTGEAFSNLADLGTLDLSFNNFSGDLPSSFSSLSNLSSLFLQNNQLTGSLDALVGLHLNTLYHGNSFDNGAAPSLPPRTCPSPFHNNDHHSGSDSEYTDGNKGLTTGDIVGIILALVFLAVMLLVLVLCIRKQQRQEKHAKTSDGSLPLGTNNEHGIESDDDTPNLEPPPAEEVMKSPITATSYTVASLQSATNRFSREFLIGEGSFGRVYKAEFPNGKLFSTFYWIMVIKKIDNAALSLQEEDSFLEAVSIMSRLRHPNIVSLTGYCAQYGQRILVYEYVGHGNLHNMLHVADYCSKALSWNARVRIALGMARALEYLHEVCLPSIVHKNFKSANILLDEELNPYLSDCGLASLMPNAMMHLLVSTEMAGSFGYCAPEFALSGTYTEKSDVYSFGVVLLELLTGRKPLGSSRVRSEQSLVRWATPQLCDIDALTKIVDPAMNGMYPAKSLSCFADTIALCVQPEPEFRPSMSEVVQALARLVQRASVARRGSSDGSSFGGHRP 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0681 642 SUPERFAMILY L domain-like 49 196 - -
Bisa04g0681 642 MobiDBLite consensus disorder prediction 277 311 - -
Bisa04g0681 642 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 419 631 - -
Bisa04g0681 642 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Bisa04g0681 642 SUPERFAMILY Protein kinase-like (PK-like) 312 617 IPR011009 -
Bisa04g0681 642 ProSiteProfiles Protein kinase domain profile. 334 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0681 642 ProSitePatterns Protein kinases ATP-binding region signature. 340 370 IPR017441 GO:0005524
Bisa04g0681 642 Pfam Protein tyrosine and serine/threonine kinase 340 617 IPR001245 GO:0004672|GO:0006468
Bisa04g0681 642 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 300 418 - -
Bisa04g0681 642 Pfam Leucine rich repeat 126 184 IPR001611 GO:0005515
Bisa04g0681 642 Gene3D Phosphorylase Kinase; domain 1 305 418 - -
Bisa04g0681 642 MobiDBLite consensus disorder prediction 211 237 - -
Bisa04g0681 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 624 IPR046959 -
Bisa04g0681 642 Gene3D Ribonuclease Inhibitor 33 221 IPR032675 -
Bisa04g0681 642 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 101 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0681 Bisa-ChrBisa04 15470677 15476015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0681 126 642 Strubbelig Receptor Gene Family AT4G22130 59.750 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bisa04g0681 PK_Tyr_Ser-Thr 2e-43 CL0016