Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0679 ATGCCAATAATGGAGGTTTTTTGCCCGAGAGCTTTTGATGTTTCAAAGAAGAGAAAGGTTCAAGAAGAAGAAGAAGACGTTCTGTGGTGTTCAAAGAAGAGAGGGGATGAACCAAAGAAGTTTCTTGCTGGCTCAAGAAAGAAAAGAAGTCTGCAAAACGATCTCTTGATTGATAATTTTGAAGAAGAAGGAGAAGATGATGATGAGGAAGCCCTGGTTTACATAAAGATGAAGTCCAGGAGAAGTAAAAAACTGGACAATGTGACAGACAAAATATGTTCAGAATCAAGTGGAGAAAGCCTATGCTCACGCAAGACCAGATCGCATTCTCCACCATCTTCCACATCACCATCTTCTGATTCGACAAACCATACTAGGGATCATGATACTGCAACAAGTATGAGGGGTACTAAAAGAGCTAGCTTGGCATGTCATCAGTGCATGAAAAAGGAGAGAAGAATTGTTGTGCCTTGCACTAAATGTGAAAAGAAGTTGTACTGTGTTCAGTGCATCAGGCAATGGTATCCTGATATGTCAGAACAAGAAATTGCAGAGAGTTGTCCATTTTGCCGGAAAAAATGCAATTGCAATGTCTGCTTGCGTTCAAGCGGGATGATTAAGACATCTGTTGGAGACGTCACCGATTCTGAGAAGGTGCAGTATCTGCGATATTTGATCAACCTAGTTCATCCATTTCTGAAACAAATGTGTGAAGAACAAGCTATAGAGGAAGAGATTGAAGCTAGAATACAAGGAAAGCCTTGTTCGGAGATTGAGATACTACAAACTCTTTGTGGTGAAGATGAACGTGTCTATTGCAGCGACCATTGTGCTACTTCAATTGTTGACCTCCATCGAAGCTGCCCTGAGTGTTCCTATGAACTCTGCCTCCAATGTTGCCATGAAATTCGCAATGGAACTATTTCACCCCGGGCAGAAGTGAAGTTTCAATATGTGAATAAGGGTTATGATTATATGCACGGTGGTGATCCTCTGCCTGGTTCATGTGATTCTGAGCCTATGGATGATCCTCATATAGAGCTATCTTCTAAGTGGAGTGCCCAAAGCAATGGAAGTGTTTGTTGTCCCCCAAAAGAAGCGGGGGGCTGTGGAAACTGCATGTTGGAGCTCAAGCACATTCTTCCACGGGGTTGGATAAATGACTTGGAAGCTAAAGTTCGTGATTTGTTAAGTAATTGCAAAACTGAACAAAATTGTTTCAAGCAGAAAAATGCTGCAGCTTCAAGCTGCTGCAACTCTAAGAGAAAAGCAGCTTCTAGAGAGGGCAATGATGACAATGACATATACTGTCCTTCTTCGAGGGACATCTTAAATGAAGGATTATTGTGCTTCCAAAAGCATTGGATGAATGGTGAACCAATCATAGTCCGTGATGTTCTTCAACAATCAACAGGATTGAGTTGGGAACCAATGGTTATCTGGCGGGCAGTGTGTGAAACCTTGGATTCAAAAATCAATTCGAATATGTCAGAAGTGAAGGCCATTGATTGCCTTGCAGGATGTGAGGTAGAAATCAACACCCGTAAATTCTTTAAAGGTTATATGGAGGGAAGAACATATAGAAATCTCTGGCCAGAGATGCTGAAGCTAAAAGACTGGCCTCCCTCTGATAAATTTGAAAATCTTTTGCCTCGCCACTGCGATGAGTTTATCTGTTCCTTGCCATTCCAAGAGTACACTGATCCTCGGGCTGGAATCCTCAATCTTGCTGTCAGGTTGCCGGTGCATGTCATGAAACCGGACATGGGTCCAAAAACATATATTGCTTATGGAGTTAAAGAAGAACTTGGCAGAGGAGATTCTGTAACAAAACTTCATTGTGATATGTCAGACGCGGTGAATATTTTGACCCATACAGCAGAAGTGAAGTTAGGTGATGAGCAACGCTTGACTATTTTAAAGTTGAAAAAGGCACACAAGGCTCAAGATGAGAAAGAGAAACAGAAAGATGATAAGGAAGTCTTAGAATTTGTGAGTACCGAGAAGTGCTATGATGAAATCAACATAAAGGCCCCTCCAAATGATGTGCTTGAAGGGGTCGCGTCTCCCGATGGTACTACAGAGAATGAGACTAGAGAAGCAGGTGCTGCTCTTTGGGACATCTTTCGTAGAGAAGATACTGAGAAGTTAGAAACATATTTAAGAAAACACTCAAAAGAGTTCAGACATACTTATTGCTCTCCAGTTGAACAGGTTGCCCATCCAATTCATGACCAATGCTTTTATTTAACTTTGGAGCACAAGAAGCAGCTGAAGGAGGAATTTGGTGTTGAACCATGGACATTTGAGCAGAAACTTGGGGAGGCAGTGTTTATTCCTGCTGGGTGCCCTCATCAAGTCAGAAATCTCATGTTCCGGAAGCTTCCCAAGAACCACAAGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTCTATGCTGCTGATCAAGTTCTCAAAGATTTAGAGGCCTTACTCAAGTGTCGTTCCTGA 2496 0.4199 MPIMEVFCPRAFDVSKKRKVQEEEEDVLWCSKKRGDEPKKFLAGSRKKRSLQNDLLIDNFEEEGEDDDEEALVYIKMKSRRSKKLDNVTDKICSESSGESLCSRKTRSHSPPSSTSPSSDSTNHTRDHDTATSMRGTKRASLACHQCMKKERRIVVPCTKCEKKLYCVQCIRQWYPDMSEQEIAESCPFCRKKCNCNVCLRSSGMIKTSVGDVTDSEKVQYLRYLINLVHPFLKQMCEEQAIEEEIEARIQGKPCSEIEILQTLCGEDERVYCSDHCATSIVDLHRSCPECSYELCLQCCHEIRNGTISPRAEVKFQYVNKGYDYMHGGDPLPGSCDSEPMDDPHIELSSKWSAQSNGSVCCPPKEAGGCGNCMLELKHILPRGWINDLEAKVRDLLSNCKTEQNCFKQKNAAASSCCNSKRKAASREGNDDNDIYCPSSRDILNEGLLCFQKHWMNGEPIIVRDVLQQSTGLSWEPMVIWRAVCETLDSKINSNMSEVKAIDCLAGCEVEINTRKFFKGYMEGRTYRNLWPEMLKLKDWPPSDKFENLLPRHCDEFICSLPFQEYTDPRAGILNLAVRLPVHVMKPDMGPKTYIAYGVKEELGRGDSVTKLHCDMSDAVNILTHTAEVKLGDEQRLTILKLKKAHKAQDEKEKQKDDKEVLEFVSTEKCYDEINIKAPPNDVLEGVASPDGTTENETREAGAALWDIFRREDTEKLETYLRKHSKEFRHTYCSPVEQVAHPIHDQCFYLTLEHKKQLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLMFRKLPKNHKAREDKLEIKKMIVYAADQVLKDLEALLKCRS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0679 831 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 139 209 IPR018866 -
Bisa04g0679 831 MobiDBLite consensus disorder prediction 101 121 - -
Bisa04g0679 831 SUPERFAMILY Clavaminate synthase-like 452 806 - -
Bisa04g0679 831 FunFam Transcription factor jumonji domain-containing protein 432 795 - -
Bisa04g0679 831 ProSiteProfiles Zinc finger RING-type profile. 144 191 IPR001841 -
Bisa04g0679 831 ProSiteProfiles JmjC domain profile. 569 831 IPR003347 -
Bisa04g0679 831 CDD cupin_RmlC-like 741 789 - -
Bisa04g0679 831 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 62 827 IPR045109 GO:0032454|GO:0033169
Bisa04g0679 831 SMART cupin_9 550 805 IPR003347 -
Bisa04g0679 831 MobiDBLite consensus disorder prediction 101 134 - -
Bisa04g0679 831 Gene3D Cupin 439 819 - -
Bisa04g0679 831 Pfam JmjC domain, hydroxylase 701 792 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0679 Bisa-ChrBisa04 15382008 15388283 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa04g0679 JmjC 1.1e-11 CL0029