Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0665 ATGACTTATAACCTTGCCACTCAAAGCCTTTGGGGAAAAGCTGGGATAGTTAGGAGCAGTAGTGATCACGTTGGGCGTCGTCTAGGTTCTGATGGAGACGCTATTAGCATATTTGGTTCCTCTAATGTTTGGATTGATCATTGCTTTTTTGCTCGTGCCACTGATGGTCTCATTGATATTATTCATGCCTCAACTGCCATCACCATTTCTAACAATTACTTCACACAGCATGATAAAGTGATGTTGCTAGGACACAGCGATCAATTCACAGCAGATAAGATCATGAAAGTAACTATAGCCTTGAACCATTTTGGTAGTGGCCTATTTGAAAGGATGCCAAGAGTAAGATTTGGTTATGCCCATGTGGTCAACAACAAATATGATGGCTGGCAGATGTATGCTGTTGGTGGGAGTGCTAACCCAACCATTTTCAGTGAAGCCAACTACTATATAGCTCCAAATGACCCTAGTCGAAAACAAATTACGAAAAGGTACGAAATTGAAGCTCCAACTCCAACTGCCCCAACAGGTGAAAAGCCACTAACTGTGCCTGCATCGCAAGTTCAACACATAAAATGA 579 0.4214 MTYNLATQSLWGKAGIVRSSSDHVGRRLGSDGDAISIFGSSNVWIDHCFFARATDGLIDIIHASTAITISNNYFTQHDKVMLLGHSDQFTADKIMKVTIALNHFGSGLFERMPRVRFGYAHVVNNKYDGWQMYAVGGSANPTIFSEANYYIAPNDPSRKQITKRYEIEAPTPTAPTGEKPLTVPASQVQHIK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0665 192 PANTHER PECTATE LYASE 18-RELATED 13 166 IPR045032 GO:0030570
Bisa04g0665 192 Gene3D - 3 180 IPR012334 -
Bisa04g0665 192 SMART amb_all 1 156 IPR002022 -
Bisa04g0665 192 MobiDBLite consensus disorder prediction 169 192 - -
Bisa04g0665 192 SUPERFAMILY Pectin lyase-like 26 161 IPR011050 -
Bisa04g0665 192 PRINTS Pollen allergen Amb family signature 133 152 IPR018082 -
Bisa04g0665 192 PRINTS Pollen allergen Amb family signature 111 130 IPR018082 -
Bisa04g0665 192 PRINTS Pollen allergen Amb family signature 31 52 IPR018082 -
Bisa04g0665 192 Pfam Pectate lyase 30 150 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0665 Bisa-ChrBisa04 14917724 14922762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0665 12 166 Polysaccharide Lyase AT1G11920 73.548 4.27e-84 251