Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0660 ATGGACTGGACAAGGGGTTGCATACTTGGCCGGGGCTCCACGGCCACCGTGTCGGTGGGGGAGGCTTGCCGGTCGGGAAGGGTATTTGCGGTGAAGTCGGCGGAGCTCCACCGAGCGGAATTCCTCAAGAGAGAACAGAGGATTCTTGCCACATTGAAGTGTCCTCAAATTGTGGAATACGAAGGTTGTGATGTTACATTTGAAAATGGGAGGTTATTGTATAACTTGTTCTTGGAGTATGCGCCTTATGGGTCAATCGCCGACGAGATTCGGAAGCGAAATGGTGATGGGTTGGATGAAAGTGTGGTCCGAGCTTATGCTCGGGAGATTCTGCTTGGGTTGATTTACTTGCATTATAATGGGATTGCGCATTGTGATATAAAATGTCAAAATGTTTTGGTCACCGATGAAGGCGCTAAAATTGCTGACTTGGGCTGTGCTCGGAGGGTTGCGGCTGAGACGGAGGATTCCGGTGAGGTGATTGCTGGCACGCCGGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGAAACAGGGGTTCCCTGCCGACGTGTGGGCTCTGGGGTGTACTGTGTTGGAGATGATCACCGGAAAGCCACCCTGGCACGGCGTTTCCGACCCGGTGAGTGTGATTTATCGGGTCGGGTTCGCCGGCGAAGCGCCGGAGATTCCAAGTTTCATGTCGGAGCAAGGCAAGGATTTTGTAACCAAGTGTTTGAATACAGACCCGAATGCGAGGTGGTCAGTGAGTGAGCTTCTCAAACATGAGTTCGTTCAGGAATCAAAATCGAAGGGATTTGATGATTCTAGCTCAGTTTCTCCAACTACAGTACTGAATCGAGGCTTCTGGGATTCATGGGAAGAAGAATTGCAGATAAACCGTAATACGAATCCGAATCCGGATCCCAACCCGACACATGATTGTTCTTGCAATCTTCATATCGCTAGAAGCAGAATTCGCAGGTTGTCTTCTTCTATGCCCAATTGGGAATCCGATGAAATGTGGATCACAGTGAGAGACAACGGCATCGCAGAGTCAGAAAGATTCTCTGATGGCCAAGAATCTGAGGTTGAAGATGACGAAAAGGCAGAGACTTCTGTGTTGGACAGTGATGGTTTCATGAGAGGCGACAATGGATTGGAAATTATTGATGAATTTAGAATAGTTACTACAGTTGGATTGAGTAATTTTTGTGATGTTAATGATGTTTGTTGCATTAGCAGCAACCATAATTGTTGCGACAGAGAATCTTTATTAGGATGTTCACAATGTGTAAAGATTGATTCCACAGGAAAATTTGATTCTCCAAAGAAGGAATTTTTTTGCATGAAATTCTCTAATTCGAATTCTACTTTCAATGCACTATGCATACATGTTAATTTCTGTTATTATGAATATTCAACACAGGACTGCAACACATGTCACATAATTATGGTTTAA 1440 0.4625 MDWTRGCILGRGSTATVSVGEACRSGRVFAVKSAELHRAEFLKREQRILATLKCPQIVEYEGCDVTFENGRLLYNLFLEYAPYGSIADEIRKRNGDGLDESVVRAYAREILLGLIYLHYNGIAHCDIKCQNVLVTDEGAKIADLGCARRVAAETEDSGEVIAGTPAFMAPEVARGEKQGFPADVWALGCTVLEMITGKPPWHGVSDPVSVIYRVGFAGEAPEIPSFMSEQGKDFVTKCLNTDPNARWSVSELLKHEFVQESKSKGFDDSSSVSPTTVLNRGFWDSWEEELQINRNTNPNPDPNPTHDCSCNLHIARSRIRRLSSSMPNWESDEMWITVRDNGIAESERFSDGQESEVEDDEKAETSVLDSDGFMRGDNGLEIIDEFRIVTTVGLSNFCDVNDVCCISSNHNCCDRESLLGCSQCVKIDSTGKFDSPKKEFFCMKFSNSNSTFNALCIHVNFCYYEYSTQDCNTCHIIMV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0660 479 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 360 - -
Bisa04g0660 479 SMART serkin_6 3 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0660 479 SUPERFAMILY Protein kinase-like (PK-like) 2 314 IPR011009 -
Bisa04g0660 479 CDD STKc_MAPKKK 2 258 - -
Bisa04g0660 479 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bisa04g0660 479 Gene3D Transferase(Phosphotransferase) domain 1 2 302 - -
Bisa04g0660 479 Pfam Protein kinase domain 8 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0660 479 ProSiteProfiles Protein kinase domain profile. 3 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0660 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0660 Bisa-ChrBisa04 14797772 14799211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0660 2 371 MAP Kinase Kinase Kinase AT5G55090 47.493 3.57e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa04g0660 Pkinase 1.4e-50 CL0016