Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0612 ATGGTAGGCCTTCCATCCACTTCATCATCCACAATGAATGAAGGGATGGATTCAAGAATTTCTATCATGGATGAGATTTTGAAGGCACTGGTCGATCCCAATGTTACTATGATTGGATTGTGTGGGCTTCCTGAGCTTGGGATTCAAAAGCTATTGGAAAGAGCTGAAGACTTGTATTTAGATGAACTAAATGGGATCACAAATGTTGTCTATGATTTGGATGGAAGAGGATTTCCACATTTGAAGCATCTTCGAGTCTTGAAAACGCGAATTATTTCGCACGTGATACTAGAAGAGGATGAAATGTATTACGTGGAAGACATTAACAAAAGAATAGAATTGGCGTTCTTAGCACAGGATCGTAAAAATGTACAGGAATTAGAGGCTTTTGATAGAGAATGCTTTGATCCGTTGAAAGGCTTGCTCATAGGTAAAAGAGCTCTCATTGGCTTGTTTGGAAAGACCTTCACATACCCTTTGGATGTTATGAAGAGACGTACGCAGCGCAGTGCTTTGTGTTGCTCAACCGCCCATCTTCGTTCTCCTTTGATTCATGCTCCAGCTTCTCCCTCTTACGTCGCTCTGTTTAATGCTTCTCACCGGAAGCATGCGAAGTGGAGAGCAAGCAAGCAAGCAAGCAGAGTGACAATGGCTCCAAAGGCTCTTCTCTTTTTCACTCTGTTATACTTTTCCACAGTACCCTCCCTACTCACTCCCACTTTTGCAGAAAATGGGGAAGACGATGGTCCTGCCCTTGTCACGAACTTCTACAAGGAATCGTGCCCTCAGGCCGAAGACATTATCAGAGAGCAAGTCAAGCTTCTCTACAAGAGCCACAAGAACACCGCCTTCTCCTGGCTCAGGAACATCTTCCACGATTGCGCCGTTCAGAGGTGCGATGCTTCGCTGCTTCTGGACTCTACGAGACGGAGCTTGTCAGAGAAGGAGACGGATAGAAGCTTCGGGTTGAGGAATTTCAGGTACATTGAGACCATCAAAGAAGCTGTAGAGAGGGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTGCTCTCTGCCAGAGATGGCGTTGTTGCGCTAGGAGGACCCTATATTCCTCTTAAAACTGGAAGAAGGGATGGAAGAAGGAGCAGAGCTGATGTGGTTGAACAATACCTCCCAGATCACAATGAGAGCATTTCTGCTGTTCTTGAAAAGTTTGCAACCATAGGGATTGACACCCCTGGTGTTGTTGCACTGCTAGGAGCACACAGTGTTGGTCGAACCCACTGTGTCAAGCTGGTGCACCGTTTGTACCCTGAGATTGATCCGGTGCTCAACCCTGACCATGTACCCCACATGCTGAAGAAGTGCCCTGACCAGATTCCAGATCCGAAGGCGGTCCAGTACGTCAGAAACGACCGTGGGACACCCATGATTCTGGACAACAACTACTACAGGAACATCCTGGACAACAAGGGCTTGCTGATAGTGGATCACCAGTTAGCCAATAACAAGAAGACCAGACCCTACGTGAAGAAAATGGCCAAGAGTCAGGACTACTTCTTCAGGGAGTTTTCCAGAGCCATCACCATACTCTCTGAGAACAACCCTCTTACTGGCTCAAAGGGTGAGATCAGAAAGCAGTGCAATGTTGCCAATAAGCACCATGAAGAGGAGCCTTGA 1668 0.4688 MVGLPSTSSSTMNEGMDSRISIMDEILKALVDPNVTMIGLCGLPELGIQKLLERAEDLYLDELNGITNVVYDLDGRGFPHLKHLRVLKTRIISHVILEEDEMYYVEDINKRIELAFLAQDRKNVQELEAFDRECFDPLKGLLIGKRALIGLFGKTFTYPLDVMKRRTQRSALCCSTAHLRSPLIHAPASPSYVALFNASHRKHAKWRASKQASRVTMAPKALLFFTLLYFSTVPSLLTPTFAENGEDDGPALVTNFYKESCPQAEDIIREQVKLLYKSHKNTAFSWLRNIFHDCAVQRCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGVVALGGPYIPLKTGRRDGRRSRADVVEQYLPDHNESISAVLEKFATIGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDPVLNPDHVPHMLKKCPDQIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANNKKTRPYVKKMAKSQDYFFREFSRAITILSENNPLTGSKGEIRKQCNVANKHHEEEP 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0612 555 PANTHER - 244 548 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 261 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 409 421 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 466 481 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 362 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 285 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 482 499 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 522 535 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Plant peroxidase signature 343 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 FunFam Peroxidase 255 398 - -
Bisa04g0612 555 Gene3D Peroxidase, domain 2 388 527 - -
Bisa04g0612 555 CDD secretory_peroxidase 252 546 IPR033905 GO:0004601|GO:0042744
Bisa04g0612 555 PRINTS Haem peroxidase superfamily signature 410 425 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Haem peroxidase superfamily signature 468 483 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Haem peroxidase superfamily signature 283 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Haem peroxidase superfamily signature 362 374 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 PRINTS Haem peroxidase superfamily signature 344 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 FunFam Peroxidase 388 527 - -
Bisa04g0612 555 SUPERFAMILY Heme-dependent peroxidases 252 548 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 Gene3D - 255 548 - -
Bisa04g0612 555 Pfam Peroxidase 269 512 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g0612 555 ProSiteProfiles Plant heme peroxidase family profile. 251 548 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0612 Bisa-ChrBisa04 13935703 13959629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0612 250 551 Peroxidase AT4G21960 84.437 0.0 555