Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa04g0597 | ATGGACGGCGATGAACCTCCCTGTCCGTCACCGTACGTTTCGTCGTCTTCGCTTCTCAGGGACATCTCCAATTTCAGAACTCCCAAGCGCGCATCTCACAACCTAAACTTCCAATCTCCTTGCCAGCAGTTTTTCACCGCTTCTATACAGACGCCGCGCTCCTCGGCGTTTCGACGCCGGCCGTCCATCGCTCCGTCTTCTGCTTGGATTAAGAAGTCATCGGCGACGGCGGCGGCCAAGAAGCTCAAGGCTTTCGAACTTGAGCAGTCTCAGTCCTCGAGGAAAGCTCAAATCAAGAAAGAGCAGTCTCTCAAATCCCTAGCGAAGTCCATCACTGTTTGGCTTAATTTTTTGTTCGAAAACCCCGCGACGTGCGGATGTGACTTGTCTATCGCCGGAATCCAGATTGGGGATAAGGATGCTGAAGCGGAAGTGACGAAGGGGAAGAGGGATAGTGGTCCTGGGATTTCCATTGGTGTGGATAAAGTCTGGCGGACTCCGAAGAGGCAGAGGAAGATGTGGTCGCGGGCTGAGGGGCGTGATGGTAAGGAGAATGATGCAGGGGAGTTGCCAAATTCTATGTTTCCGTACTTGAGGGATTCTCTGAAGGAAGTTTGCAGTTTTGATGATTTGAAGCAGCGAATGGGGGTTTATCTTAACTTGGGGAGTTGCAAAGAGATTTTTGAAGTGATGAATCAAGTCGCAAAGAATATAGATGAAGGAAGGCTAAAGTTGAAGCCACATTGCCCGATGGTAACAGATGTTGGATTGAAGAATAAGGCCACAAGAATCCTTATGTGTTACAATCCAATTTGGCTCCGTATTGGATTGTATATAATTTTTGGTGGTGACTCGTTGGTGCCAAACGAAGACTCTGACTCTGAACAAGAAATTACATTTTTGAAAATGGTCATTGAGAAGCAATTTTTCACACATGTGGGTCTGGCAAAAGCATATGCTTATAACAAGATGGTTGATGGTCTATACAGGCCAGGATACTATGAAAATTTGGGGAATGTAATTTTAAAGCGGATTTTGCTGCTTGTGCTTTTCCTGGATAGAGTTAAATATCAGAGTTGCCTTTCACTTAAGTATGGTATTGATGGACTGGATGGGGGTTCCCCTTTATTGTTCAAGGCAGAATCATGGATCAAATCAAGTAGTCAAGTGATCAATGAATTCCTATCGTCAGATGTAATGCATGGAGAAGGAAATCTTCTGACTCATTTGGTGATTATAGGGTACAAATTATCTCATCATCAGGGGCCACTTGTCGAGTATGACTTCAAGATCAGAGATTTATTTGTAGATCTCCAAGATGGATTGAAGCTGTGTAGAGCTATTCAGCTATTGCAACATAATTCTTCTATCCTTCCGAAAATTGTGGTTCCCTCAGATACTAATAAGAAGAAGTTGGCAAATTGTGGTCTTGCCTTGCAATACCTTAGGCAAGCTGGTGTGTTGCTACATGATGAGGATGATATGATGATTGTGGCAGACGATGTTGCCAATGGAGATAAAGAACTTATTCTTTCCTTGCTCTGGAATATGTTTGTTCACTTGCAGCTACCTCTTTTGGTTGATAAAACAAGTTTACTTGAGGAAATTGCTAAAATTCGAGGACTTGGCCTGGATGTCATTAACAGCGGAAATTTAAGTTCATTAGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGAAAATTATGATTGTGGCATTGAAAATTTTCATTCACTAATTGATGGAAAAGCTATCTGGTGCTTACTTGATTATTATTTCCAGAAAGAACTTCATAGTTCCTGTTCACTGAAGGAAGTTAGCACTAAAAGTGGCAAGGAATCAATAATGTCTGTTAATGATTATTCAGATGCAGTATACAATTTTATATTATCACAAAAGTTGACTACATTATTGGGAAATTTTCCAGAGGTACTTCAAATAAGTGACCTACTTGAATACAATGGCGCTTGCAGTGATCGAAGTGTGGTGATATTGTTGGTTTTCCTTGCAAGGCAATTATTTGTCAAGAAAAATATGGGTCAATTAAATTTTCATAAGCTCCTAGGCTGTGAATGCCAAAGTCTGTACCGGAAACATTTGAGAATGGGGCAGTGCCTTTTAAGTTCTGAAGCAGTACAAAAGCCAGACACTTCCGATGTGCATGACACCGAAGATGCTGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGATATGGCTGAGAGAAATCATAAATCATTCATGAAACCAACTGCATGCAGAGCCATTTCACGCAGCAACAGCATTAGAAGAGACAGTGCTGCAATAACAATACAATCACATTTCAGACGATTGGTTGCTCGTCGCATGTTTCTCAAGATGACGAATGCTGTTCCCCTTTTGCAAACTGTTTTTCGAGCTTGGCTAGCAGCGAGACAGGAGTCAGTGTTCACCATTGTTCATGTCCAAAATCTTTCATGTGCGACACGGAAGCAGTCAGAAACATACAAGAGATATGCCATGTTTTTCGTTCACAGGCACTCTTTTTTGAAGTTAAAGAGGTCAGCACTGCTCATCCAGCAGGCAGTGAGGAATTGGATCTCTTGGAGGCATCAGCAAGCACGTAGCCTAGTGGTTGCTGTCACTACTGTTCAGAAATTTGTTCGTGGTAGGATGGCACGATGTGAATATATTCGTATGCTTGATCAGAAAGAGAAAGCTTTAGATTTGTACCAACAAAATGTTAAGTTTGATCTTCAAACAAAAGCAGCCATTAGGATTCAGCTTGCTTGGAAGAAGTATTTGTGCTGCAAGTCTTCTCAGAAGCACTTCTTTGCGACTAAAATTCAAAGTAACTATCGTAGGTGGCAGTTAAGAAGAAGATATTATAATCAGATTCAAGCTATATTGAGAATCCAAAGTTATTTTCGAATGTCAAGATGTGTAAAGACTTTTCAGCACTTCAAAGTTGCAACTAAGGCAGCAATTGTCATTCAGTCTTCTGTACGTGCATGGATTGCACGGAAGGAAACATACACACGTAGGAATCAAGTCGTTGAAATTCAAAGGCATTGTCGTGGCTGGCTGGTGAGAAAGGAGTTCTTGTTCCAAAGAGGCGCTGCAATGAAGATCCAAAGTGTCATTCTCAGTCTTAAATTCCAGAAGGCTCTCAATTCTGGGAAAGATGCTGTGTTGGAGATCCAGCGTTTTATTAGGGGGCATTTAACACGAAATAGGCTGTTAGCTGGCGCTTCTCGGCAACGTGCAGTGATTCCCAGTGGTTGCATTTTAAGACCAGTTGGTGGTTATTGTAGTCTTCAACTCGAACTATTCTTGTCTTCTGTTCTGAAATTGCAGCGATGGTGGAAGGGTGTTTTGTTCCGTAATTTAAGGAAAAAGTCTGTCATTATAATCCAGTCTTGTACTCGTAGGTGGATTGCAAGGCGAATGGCAGCTCTTCGCAGACACCATATCGTTGTCATTCAATCCCACTGGAAAGGTTACCTTGCTCGGAAAGAGTCAAAAGAGCAGCTGCTGGACTTGCGTCTGAGAGTGCAGAAGTCTGCGAGAAATGTAGACGATAGTAAGCGTCTCATAAACAGACTTCTCGTAGCGCTTTCGGAGCTGCTTAATATGAAGAGTGTCAGTAACATCCTTCATACCTGTGCAACATTGGATATGGCTACAGAACATTCTCAGAGATGTTGTGAAGAACTTGTGGCTGCTGGGGCCATTGACACATTACTAAAGCTTATTCGCTCAGTAAGCCGAAGTATACCGGATCAGGAGATTCTTAAGCATGCTCTCTCAACTCTCCGAAATCTTGCCCGCTACCCTCACCTATTAGAAGTGCTGATCCAAAGTAACGGTTCCATACAAACAATTCTGTGGGAATTACTGAGAAATAAGGAAGACGGCTACTTTATTGCTTCTGAACTTTTAAAAAAGATAGCTTCGAATCATAAAGGAGTTGAATCGCTACGCAAGTTACCTGCACTTGTAAAACGACTGCATGCTCTTGTTGAGGAGCTTACAAGGAAAGCAATCTATGAGAAAAGAAATGGTAGGGGACCTAGTCCAGTTATAAAAGAAAACAGAGATAGAAGATTGAAGGAGGCTGCTGAGATTCTAAAACTGATAACTTGCACCTAG | 4134 | 0.4221 | MDGDEPPCPSPYVSSSSLLRDISNFRTPKRASHNLNFQSPCQQFFTASIQTPRSSAFRRRPSIAPSSAWIKKSSATAAAKKLKAFELEQSQSSRKAQIKKEQSLKSLAKSITVWLNFLFENPATCGCDLSIAGIQIGDKDAEAEVTKGKRDSGPGISIGVDKVWRTPKRQRKMWSRAEGRDGKENDAGELPNSMFPYLRDSLKEVCSFDDLKQRMGVYLNLGSCKEIFEVMNQVAKNIDEGRLKLKPHCPMVTDVGLKNKATRILMCYNPIWLRIGLYIIFGGDSLVPNEDSDSEQEITFLKMVIEKQFFTHVGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLLVLFLDRVKYQSCLSLKYGIDGLDGGSPLLFKAESWIKSSSQVINEFLSSDVMHGEGNLLTHLVIIGYKLSHHQGPLVEYDFKIRDLFVDLQDGLKLCRAIQLLQHNSSILPKIVVPSDTNKKKLANCGLALQYLRQAGVLLHDEDDMMIVADDVANGDKELILSLLWNMFVHLQLPLLVDKTSLLEEIAKIRGLGLDVINSGNLSSLELLLNWIQAVCENYDCGIENFHSLIDGKAIWCLLDYYFQKELHSSCSLKEVSTKSGKESIMSVNDYSDAVYNFILSQKLTTLLGNFPEVLQISDLLEYNGACSDRSVVILLVFLARQLFVKKNMGQLNFHKLLGCECQSLYRKHLRMGQCLLSSEAVQKPDTSDVHDTEDAARKFKAIQAWWQDMAERNHKSFMKPTACRAISRSNSIRRDSAAITIQSHFRRLVARRMFLKMTNAVPLLQTVFRAWLAARQESVFTIVHVQNLSCATRKQSETYKRYAMFFVHRHSFLKLKRSALLIQQAVRNWISWRHQQARSLVVAVTTVQKFVRGRMARCEYIRMLDQKEKALDLYQQNVKFDLQTKAAIRIQLAWKKYLCCKSSQKHFFATKIQSNYRRWQLRRRYYNQIQAILRIQSYFRMSRCVKTFQHFKVATKAAIVIQSSVRAWIARKETYTRRNQVVEIQRHCRGWLVRKEFLFQRGAAMKIQSVILSLKFQKALNSGKDAVLEIQRFIRGHLTRNRLLAGASRQRAVIPSGCILRPVGGYCSLQLELFLSSVLKLQRWWKGVLFRNLRKKSVIIIQSCTRRWIARRMAALRRHHIVVIQSHWKGYLARKESKEQLLDLRLRVQKSARNVDDSKRLINRLLVALSELLNMKSVSNILHTCATLDMATEHSQRCCEELVAAGAIDTLLKLIRSVSRSIPDQEILKHALSTLRNLARYPHLLEVLIQSNGSIQTILWELLRNKEDGYFIASELLKKIASNHKGVESLRKLPALVKRLHALVEELTRKAIYEKRNGRGPSPVIKENRDRRLKEAAEILKLITCT | 1377 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa04g0597 | 1377 | Gene3D | - | 550 | 675 | IPR036872 | - | |
| Bisa04g0597 | 1377 | CDD | CH_ASPM_rpt1 | 406 | 517 | - | - | |
| Bisa04g0597 | 1377 | ProSiteProfiles | Calponin homology (CH) domain profile. | 400 | 522 | IPR001715 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 870 | 892 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 764 | 786 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 1124 | 1146 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 984 | 1006 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 1147 | 1169 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 935 | 957 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 1007 | 1029 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 1053 | 1075 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 845 | 867 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SMART | iq_5 | 958 | 980 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | ProSiteProfiles | IQ motif profile. | 765 | 793 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1107 | 1171 | IPR027417 | - | |
| Bisa04g0597 | 1377 | ProSiteProfiles | IQ motif profile. | 985 | 1014 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | Calponin homology (CH) domain | 430 | 520 | IPR001715 | GO:0005515 | |
| Bisa04g0597 | 1377 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 988 | 1074 | IPR027417 | - | |
| Bisa04g0597 | 1377 | SMART | arm_5 | 1226 | 1271 | IPR000225 | GO:0005515 | |
| Bisa04g0597 | 1377 | Gene3D | - | 936 | 985 | - | - | |
| Bisa04g0597 | 1377 | Gene3D | - | 764 | 811 | - | - | |
| Bisa04g0597 | 1377 | Gene3D | - | 1124 | 1172 | - | - | |
| Bisa04g0597 | 1377 | Gene3D | - | 986 | 1033 | - | - | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 1056 | 1074 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 767 | 783 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 1127 | 1143 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 874 | 891 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 1152 | 1167 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 986 | 1004 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 940 | 956 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | Pfam | IQ calmodulin-binding motif | 1013 | 1028 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 941 | 1009 | IPR027417 | - | |
| Bisa04g0597 | 1377 | ProSiteProfiles | IQ motif profile. | 1055 | 1083 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 1237 | 1284 | IPR000225 | GO:0005515 | |
| Bisa04g0597 | 1377 | SUPERFAMILY | Calponin-homology domain, CH-domain | 324 | 601 | IPR036872 | - | |
| Bisa04g0597 | 1377 | Gene3D | - | 1173 | 1375 | IPR011989 | - | |
| Bisa04g0597 | 1377 | Pfam | Armadillo/beta-catenin-like repeat | 1227 | 1271 | IPR000225 | GO:0005515 | |
| Bisa04g0597 | 1377 | ProSiteProfiles | IQ motif profile. | 1008 | 1037 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SUPERFAMILY | ARM repeat | 1195 | 1337 | IPR016024 | - | |
| Bisa04g0597 | 1377 | ProSiteProfiles | IQ motif profile. | 1148 | 1176 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | ProSiteProfiles | IQ motif profile. | 874 | 900 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 731 | 807 | IPR027417 | - | |
| Bisa04g0597 | 1377 | ProSiteProfiles | IQ motif profile. | 936 | 965 | IPR000048 | GO:0005515 | |
| Bisa04g0597 | 1377 | PANTHER | UNCHARACTERIZED | 39 | 909 | - | - | |
| Bisa04g0597 | 1377 | Gene3D | - | 416 | 522 | IPR036872 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa04g0597 | 983 | 1142 | Myosins gene family | AT5G43900 | 27.711 | 7.22e-07 | 52.4 |