Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0574 ATGTTTCAACAACCAAACATGTTTGATTCTCATCATATCCTGGACGTGTCCCACAAGACGTCGTCCGACAGTGATTTAGTAGGAGCAATGACCAAGGACGATGATTGCGAGACCAAATCGGTGACGGAGACCATGGAAGCTCCGTCCGGCGACGATCAAGACCCGAACCAACGGCCCAAAAAAAAGCGCTACCACCGCCACACCCAGCACCAAATCCAAGAGATGGAAGCTTTCTTCAAGGAGTGCCCTCATCCAGACGACAAGCAGAGGAAAGAGCTGAGTCGTGAGCTGGGGCTTGAGCCCTTGCAAGTCAAGTTTTGGTTTCAAAACAAGCGAACTCAAATGAAGGCACAACATGAACGACATGAGAATGCTATCTTGAAGGCTGAGAATGAAAAACTGCGAGCTGAGAACAATAGGTACAAGGAAGCCCTAAGTAATGCCACATGCCCTAACTGTGGAGGCCCTGCTACTCTTGGAGAAATGTCCTTCGACGAACAACACCTCAGGATTGAGAATGCTCGCCTCGGTGAAGAGATAGATAGGATATCAGGAATTGCAGCCAAATACGTAGGAAAGCCAGTGACATCATTCTCTCACCTTTCACCTCGCATTCCATCATCACGTTGTCTTGAAGACCTCGGTGTTGGAAGCAACTTTGTCTCACAGTCTGGAGGGACAGTGGGAGAAATGTACTGTGGAAGTGGCAGTGAGCTTCTGAGGTCGTCATTTCCAGTGCCTTCTGAAGCAGACAGGCCCATGATCGTGGAGCATGCGGTTGCAGCCATGGAGGAGCTCATGAGGCTGGCTCATGCTGGAGACCCCTTGTGGGTCGTCTCTAATGGTGACCACACTGAGACTCTTAATGAAGATGAGTATCTTAGGAGCTTTCCCAGAGGGATTGGCCCTAAGCCATTAGGGTTGAAATCTGAAGCATCAAGGGAATCTGCTGTGGTCATCATGAACCATGTTAAACTCGTTGAGATTCTAATGGACGTGAATCAATGGTCAACTGTGTTCTGCGGAATTGTTTCAAGAGCAATGACACTTGAAGTACTATCAACTGGAGTGGCAGGAAACTATAATGGAGCCTTGCAAGTGATGTCGGCTGAGTTTCAAGTGCCATCACCACTGGTTCCCACAAGAGAGAACTACTTCGTAAGGTACTGCAAGCAGCACCCAGATGGCACCTGGGCAGTGGTCGATGTTTCCTTGGACAACCTCTCACCCACTGCTCTCTCCAGAAGCCGAAGAAGGCCTTCTGGTTGTTTGATTCAAGAATTACCTAATGGCTACTCCAAGGTGACTTGGATTGAACGCGTGGAAGTGGATAATAGAGCTGTACACAACATATACAGACCTCTGGTGAATTCAGGGCTTGCCTTTGGTGCTAAACGTTGGGTGGCTACCTTAGACAGACAATGTGAACGTCTTGCCAGTTCCATGGCCAGCAACATTCCTGCTGGAGACCTCTGTGTGATAACGAGTGCGGAGGGGAGGAAGAGCATGCTGAAGCTTGCAGAGAGGATGGTGAAGAGCTTCTGCACTGGTGTGGGAGCTTCCACTGCTCATGCATGGACGACACTGTCCGCAACAGGCTGTGATGATGTGAGAGTGATGACCAGAAAGAGCATGGACGATCCAGGCAGGCCTCCTGGCATTGTCCTCAGTGCTGCCACTTCCTTCTGGCTTCCTGTTCCTCCAACCAAGGTCTTCAATTTCCTCAGAGATGAAAACTCCAGGAGTGAGTGGGATATTCTATCAAATGGGGGTCTGGTCCAAGAAATGGCACACATAGCAAATGGACGTGATCCAGGCAACTGTGTCTCTTTACTTCGTGTCAATAGTGCAAATTCAAGCCAAAGCAATATGCTGATACTGCAAGAGAGCTGCACCGACCCCTCAGGCTCATACGTGATATATGGTCCTGTTGACATTATGGCCATGAACGTGGTCCTTGGAGGTGGAGACCCAGACTATGTGGCCCTCTTGCCCTCAGGTTTCGCCATTCTTCCGGATTGCTCTGCAACATCATCACTCAACAACAATGGAGGAGGAGAGGGTATGAATACTGTTGAGGTTGGGTCAGGAGGGTCTCTTCTCACAGTGGCGTTTCAGATCTTAGTGGACTCAGTGCCAACGGCAAAACTGTCTCTGGGCTCAGTGGCCACTGTCAACAGTCTCATTAAGTGCACCGTTGAGAGGATCAAAACTGCAGTCATGTGTGACTCCACGTAA 2238 0.4955 MFQQPNMFDSHHILDVSHKTSSDSDLVGAMTKDDDCETKSVTETMEAPSGDDQDPNQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENNRYKEALSNATCPNCGGPATLGEMSFDEQHLRIENARLGEEIDRISGIAAKYVGKPVTSFSHLSPRIPSSRCLEDLGVGSNFVSQSGGTVGEMYCGSGSELLRSSFPVPSEADRPMIVEHAVAAMEELMRLAHAGDPLWVVSNGDHTETLNEDEYLRSFPRGIGPKPLGLKSEASRESAVVIMNHVKLVEILMDVNQWSTVFCGIVSRAMTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHPDGTWAVVDVSLDNLSPTALSRSRRRPSGCLIQELPNGYSKVTWIERVEVDNRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASSMASNIPAGDLCVITSAEGRKSMLKLAERMVKSFCTGVGASTAHAWTTLSATGCDDVRVMTRKSMDDPGRPPGIVLSAATSFWLPVPPTKVFNFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDPSGSYVIYGPVDIMAMNVVLGGGDPDYVALLPSGFAILPDCSATSSLNNNGGGEGMNTVEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKTAVMCDST 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0574 745 FunFam Homeobox-leucine zipper protein GLABRA 2 257 476 - -
Bisa04g0574 745 CDD START_ArGLABRA2_like 252 476 - -
Bisa04g0574 745 ProSiteProfiles START domain profile. 248 480 IPR002913 GO:0008289
Bisa04g0574 745 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 57 740 IPR042160 -
Bisa04g0574 745 SUPERFAMILY Bet v1-like 250 479 - -
Bisa04g0574 745 Coils Coil 112 147 - -
Bisa04g0574 745 FunFam Homeobox-leucine zipper protein HDG1 49 134 - -
Bisa04g0574 745 Pfam Homeodomain 61 116 IPR001356 GO:0003677
Bisa04g0574 745 SMART START_1 257 477 IPR002913 GO:0008289
Bisa04g0574 745 Gene3D - 47 134 - -
Bisa04g0574 745 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Bisa04g0574 745 Pfam START domain 259 477 IPR002913 GO:0008289
Bisa04g0574 745 MobiDBLite consensus disorder prediction 18 68 - -
Bisa04g0574 745 SMART HOX_1 59 122 IPR001356 GO:0003677
Bisa04g0574 745 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
Bisa04g0574 745 SUPERFAMILY Bet v1-like 498 737 - -
Bisa04g0574 745 CDD homeodomain 61 119 IPR001356 GO:0003677
Bisa04g0574 745 Gene3D - 314 481 IPR023393 -
Bisa04g0574 745 SUPERFAMILY Homeodomain-like 46 118 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0574 Bisa-ChrBisa04 13083270 13090769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0574 4 743 Homeobox Transcription Factor Family AT4G04890 78.856 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa04g0574 START 3.6e-57 CL0209