Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0570 ATGGCTTCCCCTCATCAATCTCTTCTTGACAAACCCAAAAACCCCATTTCCAAAACCATCTTCCTAATCCTCTCTCTTGTTGCTATCATAAGCTCCTCAGCCCTAATTGCCTCTTACATCTCCAAACCCTCCTCCTTCTCCTTTTTCAACCTGTCAAACCCCAATAATCTCTGTGAACACGCCCTAGACAAACAATCATGCCTAACCCATGTCTCAGAATTGCCCAAAGTTTCAACCTTTACTGCAAAAGACCACAAACTCAACCTCCTACAAACCTTCCTAATGAGATCCACCTCACAAATCAAGAAAGCCATAGACACAACCAAGGCTATCAAGTCTAGAATCAACAACCCCAAAGACCAGGAATCTTTGTCTGTTTGTGAGAATCTCCTGGACTTGTCAATTGATAGAACTTTTGACTCAGTGATGGCTTTAACTAAAAAATCTACCAAATCCCACCAAGATGCTCACACATGGCTGAGCTCTGTGCTCACTAACCATGTCACTTGCTTGGATGGGCTTGAAGGCCCAGCTAGGGCCCTCCTGGAGCCTGAGCTCAATGACTTGGTCTCCAGGGCAAGAACCACCCTAGCCATGCTTGTTCATGTTCTGAATTCTAATGTTGATGATGCCATGGAGTCACTCAACGGTGATCAGTTTCCTTCTTGGGTTCCACGCAGGGATAGGAAGCTTTTGGAAGCTTCTTCTGCTAAGGATGTTAAGGCCAATGTTGTGGTGGCTCAGGATGGAAGTGGGAAGTTTAAGACTGTGAAAGACGCTGTGACTGCAGCACCTGATAACAGTAACACTAGGTATGTTATATATGTGAAAAAGGGAACTTATAAAGAGAACTTTGAGATTGGGAAGACGAAGAAGAATATTATGCTTGTTGGTGATGGTATGGATGCCACTATCATCACTGGAAGCTTGAACTTTGTGGATGGAACACCCACCTTCAACACTGCCACTGTTGCTGCTTCTGGAGATGGATTCATAGCCCAAGATGTATGGTTCCAAAACACAGCAGGCCCAGTGAAGCACCAAGCCGTGGCTCTCCGTGTCAGTGCCGATCTATCCGTTATAAACCGCTGTCGGATTGATGCCTTCCAAGACACTCTCTATACCCACACCAACAGGCAATTCTATCGTGATTCTGTCATCACCGGCACAGTTGACTTTATCTTCGGTAACGCCGCGGTTGTGTTCCAAAAGTGTAACCTAGTGGCCCGAAAGCCCATGGCCCAGCAGAACAACATGTTCACGGCCCAAGGACGTGTAGACCCAAACCAAAACACCGGGACTTCTATCCAACAATGTAACCTATCGCCAAGCTCGGACCTCAAGCCCGTTGTGGGCTCATTCAAAACCTTCTTGGGCCGCCCGTGGAAGGAGTACTCTCGGACCGTTGTGATGCAGTCGTTCCTTGATAGCCATATCGACCCAACAGGATGGGCCCCGTGGGATAACAAGCAATCCACATTGAAAAATTTGTACTATGGAGAGTACCTGAACAATGGGCCAGGGGCCGGGACCAGCAAGAGAGTGAAATGGGCCGGGTATCATGTGATTACAAGTGCTGCAGAGGCCAGTAAGTTCACTGTGGCCCAGTTCATTCAAGGTGGGGTTTGGTTGAAGAACACTGGGGTGGCCTTCACTGAGGGGCTGTAA 1668 0.4766 MASPHQSLLDKPKNPISKTIFLILSLVAIISSSALIASYISKPSSFSFFNLSNPNNLCEHALDKQSCLTHVSELPKVSTFTAKDHKLNLLQTFLMRSTSQIKKAIDTTKAIKSRINNPKDQESLSVCENLLDLSIDRTFDSVMALTKKSTKSHQDAHTWLSSVLTNHVTCLDGLEGPARALLEPELNDLVSRARTTLAMLVHVLNSNVDDAMESLNGDQFPSWVPRRDRKLLEASSAKDVKANVVVAQDGSGKFKTVKDAVTAAPDNSNTRYVIYVKKGTYKENFEIGKTKKNIMLVGDGMDATIITGSLNFVDGTPTFNTATVAASGDGFIAQDVWFQNTAGPVKHQAVALRVSADLSVINRCRIDAFQDTLYTHTNRQFYRDSVITGTVDFIFGNAAVVFQKCNLVARKPMAQQNNMFTAQGRVDPNQNTGTSIQQCNLSPSSDLKPVVGSFKTFLGRPWKEYSRTVVMQSFLDSHIDPTGWAPWDNKQSTLKNLYYGEYLNNGPGAGTSKRVKWAGYHVITSAAEASKFTVAQFIQGGVWLKNTGVAFTEGL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0570 555 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Bisa04g0570 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 223 IPR035513 -
Bisa04g0570 555 FunFam Pectinesterase 237 555 - -
Bisa04g0570 555 Pfam Pectinesterase 243 540 IPR000070 GO:0030599|GO:0042545
Bisa04g0570 555 Pfam Plant invertase/pectin methylesterase inhibitor 55 188 IPR006501 GO:0004857
Bisa04g0570 555 SMART PMEI_2 49 199 IPR006501 GO:0004857
Bisa04g0570 555 NCBIfam pectinesterase inhibitor domain 50 179 IPR006501 GO:0004857
Bisa04g0570 555 Gene3D - 237 555 IPR012334 -
Bisa04g0570 555 PANTHER PECTINESTERASE 27 545 - -
Bisa04g0570 555 SUPERFAMILY Pectin lyase-like 241 554 IPR011050 -
Bisa04g0570 555 CDD PMEI-like_4 65 201 - -
Bisa04g0570 555 ProSitePatterns Pectinesterase signature 1. 268 287 IPR018040 -
Bisa04g0570 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0570 Bisa-ChrBisa04 12922347 12924530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0570 1 555 Carbohydrate Esterase AT1G11580 56.762 0.0 625