Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0564 ATGGCTGCCTCACAACATTCGTCCACTGACGAAGCCTTGGAGAACCTTCAAGAGGAGACCAGAGAAGAACCAAAGCTAGATTTCTCCAATGATGAGGAAGCACTGATTATCAGAATGTACAACCTTGTTCGCGAAAGGTGGGATTTAATAGCTGGCAGGATCCCAGGAAGAACAGCTGAAGAGATCGAAAAGTACTGGAATTCAAGATACTCTACAAGTGCATGA 225 0.4489 MAASQHSSTDEALENLQEETREEPKLDFSNDEEALIIRMYNLVRERWDLIAGRIPGRTAEEIEKYWNSRYSTSA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0564 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Bisa04g0564 74 CDD SANT 28 67 IPR001005 -
Bisa04g0564 74 Gene3D - 27 70 - -
Bisa04g0564 74 Pfam Myb-like DNA-binding domain 27 68 IPR001005 -
Bisa04g0564 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 71 - -
Bisa04g0564 74 MobiDBLite consensus disorder prediction 1 27 - -
Bisa04g0564 74 FunFam MYB-like transcription factor 27 69 - -
Bisa04g0564 74 SUPERFAMILY Homeodomain-like 27 70 IPR009057 -
Bisa04g0564 74 SMART sant 24 72 IPR001005 -
Bisa04g0564 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Bisa04g0564 74 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0564 Bisa-ChrBisa04 12870664 12871114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0564 27 68 MYB Transcription Factor Family AT5G35550 61.905 2.11e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa04g0564 Myb_DNA-binding 7.4e-08 CL0123