LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa04g0539	ATGAAGCTCTTCAAAGTTTCACCTACTGATCTCACTGTTTTCATCTTCTTGATTCCCAGTGTTACAGTAATAATAACCAGCACCATAGCAACACCAACAGATGAGGCTTATTACTAACCAACGTCAAAAGGAAAAACCCGGGTCTCAATGGCCATAGTCATTGCAATTGTGGCTCCAATTGTGCTTGCTCTGTTGCTTGTCTTCCTTGCTTGCTGGTTCATAACCAGAAGAGCAAGCAAGAACTATTCAAAGCCAGAAGAAAATGTTGAAAATTTCAGTGTAGAGTACTTGCAATTCGACTTCGAAACAATCAAACTGGCCACAAACAACTTCAGTGATGACAACAAATTGGGTGAAGGAGGATTTGGTGAAGTTTTCAAGGGGACACTTTTTAATGGGCAAGATATAGCAGTGAAGAGGCTATCAAGAAATTCTCTGCAAGGAATAGATGAATTCAAAAACGAGATGGTTTTAGTAGCCAAACTTCAACACAAAAACCTTGTAAGGCTTTTGGGATTTTGCTTGGATGGAGAAGAGAAAATCCTCATTTACGAGTTTGTCGCCAACAAAAGCTTGGACTATTTTCTTTTTAACACTGAAAGGCAACATCAATTGAATTGGCCCCAAAGATACAAGATAATAGAAGGAATTGCTCGAGGAATGCTTTATCTTCATGAAGATTCTCGACTCAAAATCATTCATCGTGATCTTAAAGCTAGTAATATACTGTTAGATGAAGATTTGAATCCAAAAATTGCAGATTTTGGCATGGCAAGAATTTTTGGTGCTGATCAAACTGAAGGAAACACAAGCAGAGTTGTGGGGACATTCGGTTACATGTCTCCAGAATATGCAATACATGGCCAACTTTCTGTCAAAATGGATGTTTATAGCTTTGGCGTCCTTGTTCTAGAGATTATAAGTGGGAAGAAGAATACATCTTTTCGTGAATCAGGCTATGCTGAGGACCTCTTGAATTATGCCTGGAAAAAATGGAGAGATGGGACGCCATTAGAATTGTTGGATGTGAGTTTGAGAGACTCTTGTAGGAGAGATGAAGTGAGTAGATGCATCCACATAGGGTTATCATGTGTTCAGGAAGATCCATCTCAAAGGCCAACGATGCAGACGATAGTTATAATGCTGAACAGTCACTCTGTCACTCTGGCATCACCTGAAAGGCCTCCATTTTTGGTTCATAGCAAAACCGTTGAGCCTAGCTTGCAATTGGTGGTTTCATCAGACGAGTCTAACACAAGAAAACCAGTCTCAGATCACTCTATTGATGATGCATCTATCACTCAAGTGTACCCTCGGTAG	1320	0.4	MKLFKVSPTDLTVFIFLIPSVTVIITSTIATPTDEAYYXPTSKGKTRVSMAIVIAIVAPIVLALLLVFLACWFITRRASKNYSKPEENVENFSVEYLQFDFETIKLATNNFSDDNKLGEGGFGEVFKGTLFNGQDIAVKRLSRNSLQGIDEFKNEMVLVAKLQHKNLVRLLGFCLDGEEKILIYEFVANKSLDYFLFNTERQHQLNWPQRYKIIEGIARGMLYLHEDSRLKIIHRDLKASNILLDEDLNPKIADFGMARIFGADQTEGNTSRVVGTFGYMSPEYAIHGQLSVKMDVYSFGVLVLEIISGKKNTSFRESGYAEDLLNYAWKKWRDGTPLELLDVSLRDSCRRDEVSRCIHIGLSCVQEDPSQRPTMQTIVIMLNSHSVTLASPERPPFLVHSKTVEPSLQLVVSSDESNTRKPVSDHSIDDASITQVYPR	439

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa04g0539	439	CDD	STKc_IRAK	117	383	-	-
	Bisa04g0539	439	FunFam	Cysteine-rich receptor-like protein kinase 10	75	186	-	-
	Bisa04g0539	439	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	42	435	-	-
	Bisa04g0539	439	SMART	serkin_6	111	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa04g0539	439	SUPERFAMILY	Protein kinase-like (PK-like)	92	413	IPR011009	-
	Bisa04g0539	439	ProSitePatterns	Protein kinases ATP-binding region signature.	117	139	IPR017441	GO:0005524
	Bisa04g0539	439	FunFam	cysteine-rich receptor-like protein kinase 10	187	389	-	-
	Bisa04g0539	439	ProSiteProfiles	Protein kinase domain profile.	111	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa04g0539	439	MobiDBLite	consensus disorder prediction	412	439	-	-
	Bisa04g0539	439	Gene3D	Phosphorylase Kinase; domain 1	73	186	-	-
	Bisa04g0539	439	Gene3D	Transferase(Phosphotransferase) domain 1	187	392	-	-
	Bisa04g0539	439	Pfam	Protein tyrosine and serine/threonine kinase	114	380	IPR001245	GO:0004672\|GO:0006468
	Bisa04g0539	439	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	232	244	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa04g0539	Bisa-ChrBisa04	11821635	11826831	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa04g0539	26	439	Receptor kinase-like Gene Family	AT4G05200	57.177	5.25e-167	484

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bisa04g0539		PK_Tyr_Ser-Thr	2.9e-49	CL0016