Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0538 ATGCCCCTGTTTATCTCTCCCACTTCTGCTCAACCAACAAAACCTTCACTTCCAATAGCCCCTACCATCTCAGCCTCACCACCCTCCTCTCCTCCTTATCTTCCCACGCCTCCGGATCCCTCGAATTCTTCAACACCACCGTCCATGGCGGCGCCGGCGCCACCGTCCACGGCCTCTTCCTCTGCCGCGGAGACGTCACTTCTCAGAGAGGTTGAAGATGAGCACGCGCGTGAAGCGCGTCACCCTTCTTTTTCCACTGATGGGGATAAGGAAGACTCGGCTGCTCAAGGAGAAAGGAAAGACAAATATCAACGAACCATTGTCATGGTTGTTGTCCCAGTTGTCGTACCAGGGATGCTTTACTATTTCGTCTTCTATTTGATACGCAGGAAATCGAGGAAGAGATATGCTATTCTCAAACAAAATTTTGGAAATGAAGGTACTACGTTGGAGTCATTGCAATACGATTTTGCTACAATTGAAGCTGCAACAAACAGGTTTTCATATGAGAACAGGATAGGCCGAGGCGGATTTGGAGAAGTTTACAAGGGTACTCTTCCTAATGGACAAAAAATAGCTGTAAAGAGACTCTCTGGGACTTCTGACCAAGGAGCAGTAGAATTCAAGAATGAGGTTTTATTAATAGCCAAGCTTCAACACAGAAATCTGGTGACATTGTTGGGATTTTGCTTGCAAGATCATGAGAAGATACTTGTTTATGAATTTGTACCCAATAAGAGCCTCGATTACTTTCTCTTTGATTCTGAAAAGCAGAGGCTGTTAGATTGGCCTAGGCGCTTTAAAATCATAGAAGGGATTGCTCGAGTAATTCTTTATCTACATGAGCATTCGCGCCTCAAAATTATACACCGTGATCTCAAACCTAGTAATGTTTTATTAGATGATAATATGAACCCAAAACTATCAGATTTTGGTATGGCAAGAATGGTTGCGATAGATCAAGACCAAGGAAGAACAAGAAGAATAGTTGGGACATATGGTTATATGTCTCCGGAATATGCAGTATTTGGAAAATACTCAGAGAAATCAGACATATTTAGTTTTGGAGTTATGATCTTGGAGATTATCAGCGGAAAAAAGAGTGCTAAATCTTATGAGTCACCTAGTGTGGATGGCCTCTTGACTCAGGCTTGGAAACAATGGAGAGATGAGACACCATTGGAAATAATTGATCCAAATTTAAGAGAATCTTACAGTGAAACAGAAGTTAGTAAGTGCATTCAGATAGGGCTATTATGTGTTCAAGAGAATGCAGATGATAGGCCTCAAATGTCAAGAGTTGTCTCATATTTAAGTAATCTGTCAGTGGAATTGCCATTTCCTCGTGAACCTGCATTTTATGTACATAGCAGGATGGAGCCAAATATGGTAGCACTTGAATCAAGTTCAGGTCAATCTACCAATAATTCCATTCGTTCTATCAATGGAATGTCTATAAGTACTTCTTTTCCTCGATAA 1479 0.4165 MPLFISPTSAQPTKPSLPIAPTISASPPSSPPYLPTPPDPSNSSTPPSMAAPAPPSTASSSAAETSLLREVEDEHAREARHPSFSTDGDKEDSAAQGERKDKYQRTIVMVVVPVVVPGMLYYFVFYLIRRKSRKRYAILKQNFGNEGTTLESLQYDFATIEAATNRFSYENRIGRGGFGEVYKGTLPNGQKIAVKRLSGTSDQGAVEFKNEVLLIAKLQHRNLVTLLGFCLQDHEKILVYEFVPNKSLDYFLFDSEKQRLLDWPRRFKIIEGIARVILYLHEHSRLKIIHRDLKPSNVLLDDNMNPKLSDFGMARMVAIDQDQGRTRRIVGTYGYMSPEYAVFGKYSEKSDIFSFGVMILEIISGKKSAKSYESPSVDGLLTQAWKQWRDETPLEIIDPNLRESYSETEVSKCIQIGLLCVQENADDRPQMSRVVSYLSNLSVELPFPREPAFYVHSRMEPNMVALESSSGQSTNNSIRSINGMSISTSFPR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0538 492 ProSiteProfiles Protein kinase domain profile. 167 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0538 492 MobiDBLite consensus disorder prediction 1 20 - -
Bisa04g0538 492 Gene3D Transferase(Phosphotransferase) domain 1 243 446 - -
Bisa04g0538 492 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 54 488 - -
Bisa04g0538 492 MobiDBLite consensus disorder prediction 67 100 - -
Bisa04g0538 492 SUPERFAMILY Protein kinase-like (PK-like) 151 464 IPR011009 -
Bisa04g0538 492 MobiDBLite consensus disorder prediction 21 53 - -
Bisa04g0538 492 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 128 242 - -
Bisa04g0538 492 Gene3D Phosphorylase Kinase; domain 1 130 242 - -
Bisa04g0538 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Bisa04g0538 492 MobiDBLite consensus disorder prediction 468 492 - -
Bisa04g0538 492 CDD STKc_IRAK 173 441 - -
Bisa04g0538 492 Pfam Protein tyrosine and serine/threonine kinase 169 438 IPR001245 GO:0004672|GO:0006468
Bisa04g0538 492 FunFam cysteine-rich receptor-like protein kinase 10 243 445 - -
Bisa04g0538 492 MobiDBLite consensus disorder prediction 1 100 - -
Bisa04g0538 492 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
Bisa04g0538 492 SMART serkin_6 167 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0538 Bisa-ChrBisa04 11753894 11757609 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0538 88 474 Receptor kinase-like Gene Family AT4G23190 53.964 6.18e-144 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa04g0538 PK_Tyr_Ser-Thr 2.2e-46 CL0016