Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0533 ATGGGCGTTTGTTTCTTGAGAAAAAGAACAAGGGAAAAGTTCGACTCTGTAAACTACAAATGCTTGAAAGTTGAAGCCACTAGCAGAGCTGAACTTGTGACTAACAAGCTGCCCACCATGGCCTTCTCAAACAGTCAAAACAGAACCATCACCATAACCAACTCTTCCTTCAAACTCATCCTTCTCTCTGTTTCACTCATCTTCCTCAATTTTCCTATCATTGATTCAGCAGATGGCCCCACTTTCCTCCGTGAAAACTGCACAGCCACCGAAAGCTTCCCTCCAAACAGCCCCTTCCAATCCAACCTCAGAACCCTTCTCTCTTTCCTATCTTCCAACGCCACCGGCACCACCCAATTCTTCAACACCACAGTCGCCGGCGGAACCAACTCCGACGCCGTCTACGGCCTCTTCATGTGCAGGGGTGACGTCCCTCCCGACCTCTGTAAAGAATGCGTCTTTAACGCAACCCAGAGACTCAGCAATCGAGGTTCCGACACGTGTCCCTTCTCCAAAGCGGCAATATTGTGGTACGACGAGTGTATGCTTCGCTATTCCGACAGGAACTTCTTCTCCACGATGGACACGAGGCCCAGAATGCGCCTGAGGAACACCGAGAATGTCACCGACACGATAAAACAGAGGTTTATGCGTTTGATGTACACCACCTTGAACGAAACGGCGGACGAGGCGGCGAAAACGACGGTGGGTGAAAAGAAGTATGCGACAAGGCAAGCGAATTTGAGTACGTTTCAGACACTGTACTGTCTGGTACAGTGCACGCCGGACCTGTCGGCCCAAGATTGCAGGAGGTGTCTGGGGCTTGTGATTGAGGATGTTGCGTGGTGTTGCACGTACAGGATTGGAGGAAGAGTGCTTTATCCCAGCTGTAATTTCAGGTATGAATTGTACCCTTTCTATAGAGAGGCTTCGTCAACAACAACTCCTACAACACCAACTCCTACCACTTCTGCAGAACACAAAGGGAAAGGTGGAATTTCATCTGGAACTATCGTTGCAATTGTGGTTCCAATCACAGTGGCTGCTCTGCTGTTTGTGGTGGGATTTTGTTTCTTGATCAAAGGAACAAGGAAGAAGCAAGACACTGTCAAGGAAGGAAAATCTGGTGCAAGTGAAATCACCACAATGAAGTCATTGCAATTTGATTTCAGTACAATTGAAGCAGCCACAAACAAGTTTTCTGCAGATAACAAGCTAGGTGAAGGTGGATTTGGAGAGGTTTACAAGGGCATTCTTCCTAGTGGGAAAGAAATAGCTGTTAAGAGACTCTCTAGAGGCTTTGGACAAGGTCGAGTAGAATTTAAGAATGAAGTAGTGGTGGTTGAAAAGCTTCAACACAGAAATTTAGTGACGCTTTTAGGATTTTGCTTGGAAGAAGAAGAGAAGATACTTGTTTATGAATTTGTTCCCAACAAAAGTCTTGACTACATACTTTTTGATCTTGAAAAGCAGAGAGAGTTGAATTGGAATACACGTTACAAGATTATTGGAGGGGTTGCAAGAGGCATTCAATATCTTCATGAAGAATCTAGGCTTAGGATTATTCATCGTGATCTTAAAGCTAGCAATATATTGTTAGACAAGGATTTGAATCCAAAAGTCTCAGATTTTGGCATGGCAAAAATTTTTGGAGTCGATCAAACTCAAGGAAATACTAGTCGGATTGTTGGGACATATGGTTACATGTCTCCCGAATATGCTATGCATGGAGAATTTTCTGTTAAGTCCGATGTGTATAGTTTTGGCGTCCTACTTATGGAGATTATAAGTGGCAAGAGGAATAGCTCTTTCTATCAAATTGATGGTGCTGAAGACCTTCTGAGTTATGCTTGGAAACTTTGGAAGGAAGGGGTATCTTTGGAAATGTTAGATCCCACATTAAGAGGATCCCATGATCCAAATGAAGTTATTAGATGCATCCACATTGGATTACTGTGTGTTCAAGAAGATCCAGCAGATAGACCTACAATGGCATCAATAGTACTCATGCTTGATAGTTATTCTGTGACTCTGCCAGCACCTAAACAACCTGCATTTTGCATCCACAGTGGAACTGATCCAAAGTCAACGTCAGTATCTGTGAATGCAATCTCAATCAGTGAAATAATTCCTAGGTAA 2139 0.4395 MGVCFLRKRTREKFDSVNYKCLKVEATSRAELVTNKLPTMAFSNSQNRTITITNSSFKLILLSVSLIFLNFPIIDSADGPTFLRENCTATESFPPNSPFQSNLRTLLSFLSSNATGTTQFFNTTVAGGTNSDAVYGLFMCRGDVPPDLCKECVFNATQRLSNRGSDTCPFSKAAILWYDECMLRYSDRNFFSTMDTRPRMRLRNTENVTDTIKQRFMRLMYTTLNETADEAAKTTVGEKKYATRQANLSTFQTLYCLVQCTPDLSAQDCRRCLGLVIEDVAWCCTYRIGGRVLYPSCNFRYELYPFYREASSTTTPTTPTPTTSAEHKGKGGISSGTIVAIVVPITVAALLFVVGFCFLIKGTRKKQDTVKEGKSGASEITTMKSLQFDFSTIEAATNKFSADNKLGEGGFGEVYKGILPSGKEIAVKRLSRGFGQGRVEFKNEVVVVEKLQHRNLVTLLGFCLEEEEKILVYEFVPNKSLDYILFDLEKQRELNWNTRYKIIGGVARGIQYLHEESRLRIIHRDLKASNILLDKDLNPKVSDFGMAKIFGVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLMEIISGKRNSSFYQIDGAEDLLSYAWKLWKEGVSLEMLDPTLRGSHDPNEVIRCIHIGLLCVQEDPADRPTMASIVLMLDSYSVTLPAPKQPAFCIHSGTDPKSTSVSVNAISISEIIPR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0533 712 Pfam Protein tyrosine and serine/threonine kinase 402 669 IPR001245 GO:0004672|GO:0006468
Bisa04g0533 712 FunFam cysteine-rich receptor-like protein kinase 10 476 678 - -
Bisa04g0533 712 Gene3D Transferase(Phosphotransferase) domain 1 476 680 - -
Bisa04g0533 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Bisa04g0533 712 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 80 706 - -
Bisa04g0533 712 Pfam Salt stress response/antifungal 212 304 IPR002902 -
Bisa04g0533 712 Pfam Salt stress response/antifungal 87 187 IPR002902 -
Bisa04g0533 712 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Bisa04g0533 712 Gene3D Phosphorylase Kinase; domain 1 361 475 - -
Bisa04g0533 712 SUPERFAMILY Protein kinase-like (PK-like) 385 694 IPR011009 -
Bisa04g0533 712 ProSiteProfiles Gnk2-homologous domain profile. 81 190 IPR002902 -
Bisa04g0533 712 ProSiteProfiles Protein kinase domain profile. 400 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0533 712 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 361 475 - -
Bisa04g0533 712 Gene3D - 80 190 IPR038408 -
Bisa04g0533 712 Gene3D - 199 306 IPR038408 -
Bisa04g0533 712 ProSiteProfiles Gnk2-homologous domain profile. 196 306 IPR002902 -
Bisa04g0533 712 FunFam Cysteine-rich receptor-like protein kinase 25 198 306 - -
Bisa04g0533 712 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 80 189 - -
Bisa04g0533 712 SMART serkin_6 400 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0533 712 CDD STKc_IRAK 406 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0533 Bisa-ChrBisa04 11042669 11047166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0533 63 712 Receptor kinase-like Gene Family AT4G05200 52.065 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa04g0533 PK_Tyr_Ser-Thr 2.1e-47 CL0016