Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0530 ATGTTGAGTGATTTGGCCGGGAAAGCTAATTCGCAGACGGGGAAGAAGTTCGCTACAGAACAAAAGAGCCTGACTTCGTCACAAACGTTGTACGGCTTAGTACAGTGTTATCCTGATTTGTCGAATTTTGACTGTAACATGTGTTTGCAGAGCGCCGTTGCAGCTTTGCCTAATTGCTGTGGTAACAGAAAGGGGGCTAGGGTTCTTCTTCCTGCGTGTAATATCAGATATGAACTTTACCCTTTTTACAATGTGTCTGTTCCTGCACCTGTTCCTCGTCCTTCAGGAAGAACAAATGTCTCAATAATTATTGCAATCATTGTCCCCATTGTTGTTTCTGTGGCACTTTTTGTTGTGGCTTGCTGTTTCCTGCGTAAGAGGGCAAGCAAGAAGTATAATACGTTCGTCGAAGATGACATTGAAAGTGATCTCACGGACATAGAGTCTTTGCAATTTGACATGGCTACAATAGAAGTTGCCACAAACAAGTTCTCAGAAGTGAACAAGATTGGCCAAGGAGGATTTGGTGCAGTATATAAGGGTATTCTTCCTAATGGACAAGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCGTTGCAGGGTGCTTTGGAGTTTAGGAATGAAGCTGCTCTTGTAGCTAAACTTCAACATAGAAATTTAGTGAGGCTATTAGGGTTTTGCTTAACCGGACAAGAGAAGATACTTGTCTATGAATATATCCCAAACAAAAGCCTAGATCACATTCTATTTGATCCTGGGAAGAAAGGAGTGCTAGATTGGTCGAGACGCTACAAGATAATAGTAGGAATTGCTCGTGGAATTCTTTATCTCCACGAAGATTCACAACTTAGAATAATACATCGTGATCTCAAAGCTAGCAATGTGTTATTAGATGCAGATATGAATCCAAAGATTTCAGACTTTGGCATGGCAAGAATCTTTCATGGGGATCAAACTCAAGTGAACACAAGAAGAATAGTTGGCACTTACGGTTACATGTCTCCAGAGTGTGCAATGCGTGGACAGTTTTCTGTAAAATCAGATGTGTTTAGCTTCGGTGTCTTGGTTTTAGAGATTGTTACTGGCAAGAAGAACACTGATTTTCACCAACTATATCAAGACGATGACCTCTTGAGCTATACCTTCAATGGCAACTATAGCTCTTATGCTCAATAG 1176 0.4107 MLSDLAGKANSQTGKKFATEQKSLTSSQTLYGLVQCYPDLSNFDCNMCLQSAVAALPNCCGNRKGARVLLPACNIRYELYPFYNVSVPAPVPRPSGRTNVSIIIAIIVPIVVSVALFVVACCFLRKRASKKYNTFVEDDIESDLTDIESLQFDMATIEVATNKFSEVNKIGQGGFGAVYKGILPNGQEIAVKRLSVTSLQGALEFRNEAALVAKLQHRNLVRLLGFCLTGQEKILVYEYIPNKSLDHILFDPGKKGVLDWSRRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDADMNPKISDFGMARIFHGDQTQVNTRRIVGTYGYMSPECAMRGQFSVKSDVFSFGVLVLEIVTGKKNTDFHQLYQDDDLLSYTFNGNYSSYAQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0530 391 FunFam Cysteine-rich receptor-like protein kinase 10 125 239 - -
Bisa04g0530 391 Gene3D Phosphorylase Kinase; domain 1 125 239 - -
Bisa04g0530 391 Pfam Salt stress response/antifungal 2 80 IPR002902 -
Bisa04g0530 391 ProSitePatterns Protein kinases ATP-binding region signature. 170 192 IPR017441 GO:0005524
Bisa04g0530 391 SUPERFAMILY Protein kinase-like (PK-like) 147 380 IPR011009 -
Bisa04g0530 391 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 378 - -
Bisa04g0530 391 ProSiteProfiles Protein kinase domain profile. 164 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0530 391 Gene3D - 1 82 IPR038408 -
Bisa04g0530 391 ProSiteProfiles Gnk2-homologous domain profile. 1 82 IPR002902 -
Bisa04g0530 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Bisa04g0530 391 Pfam Protein tyrosine and serine/threonine kinase 167 365 IPR001245 GO:0004672|GO:0006468
Bisa04g0530 391 Gene3D Transferase(Phosphotransferase) domain 1 240 387 - -
Bisa04g0530 391 SMART serkin_6 164 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0530 391 FunFam Lectin-domain containing receptor kinase A4.3 240 388 - -
Bisa04g0530 391 FunFam Cysteine-rich receptor-like protein kinase 10 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0530 Bisa-ChrBisa04 10981347 10984248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0530 1 382 Receptor kinase-like Gene Family AT4G05200 57.250 2.85e-158 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa04g0530 PK_Tyr_Ser-Thr 4.7e-46 CL0016