Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0474 ATGGAGACTGAGATAATTTCTGAAGAATGGAGCTCTCTGAGTGGGTTTTACACAGCTGAGGAATCCGAGTTCATGACTCAGTTCCTTGGAAACTGTTTCAATACAGAGACGATCTCCATGGCCATGGGTTTTCCATATAATGTTCAGAGGAATATTGAACACTTTGGCCAACAGATCAGTGAAGCCATTGAGGAAGAAGAGGATGAAATGAAGAACTCTGCAAAAAGATGTAGGAGTTCAGAAGAGATTCCAAGGAACAAGATCATCAAGTCTAAGAAGAATCCAAAATCTTCTTCCACAAGCAATGGGCAGAACCCTAGCAATTATTGCTCATCAGAGGATGACTCAAGTGCTTCTCAAGGAGGGAACCGAAACCCTAAAAACAATAAAGCTTTTAAGTCAAATGGAAAATCAAGATCTAATGGAGGTCCTTCCACTGATCCACATAGTGTCTATGCAAGAAGGAGAAGAGAAGGAATAAACGAAAGGTTGAGAATCCATCAAAATCTTGTCCCCAGTGGAACAAAGGTTGACATCAGAACCATGCTCGAGGAAGCTGTCCAATATGTGAAGTTTTTGCAGCTCCAGATTAAGCTTCTGAGCTCAGATGATCTATGGATGTATGCTCCAATTGCTTACAATGGATTGAACATTGGATTGGATCTCAATATCACACCAACCAAACAACCGTAG 693 0.4113 METEIISEEWSSLSGFYTAEESEFMTQFLGNCFNTETISMAMGFPYNVQRNIEHFGQQISEAIEEEEDEMKNSAKRCRSSEEIPRNKIIKSKKNPKSSSTSNGQNPSNYCSSEDDSSASQGGNRNPKNNKAFKSNGKSRSNGGPSTDPHSVYARRRREGINERLRIHQNLVPSGTKVDIRTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLNIGLDLNITPTKQP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0474 230 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Bisa04g0474 230 Coils Coil 56 83 - -
Bisa04g0474 230 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 210 IPR036638 GO:0046983
Bisa04g0474 230 MobiDBLite consensus disorder prediction 66 151 - -
Bisa04g0474 230 MobiDBLite consensus disorder prediction 68 89 - -
Bisa04g0474 230 SMART finulus 150 199 IPR011598 GO:0046983
Bisa04g0474 230 CDD bHLH_AtIND_like 145 207 - -
Bisa04g0474 230 Gene3D - 145 207 IPR036638 GO:0046983
Bisa04g0474 230 FunFam Basic helix-loop-helix transcription factor 145 202 - -
Bisa04g0474 230 Pfam Helix-loop-helix DNA-binding domain 151 194 IPR011598 GO:0046983
Bisa04g0474 230 MobiDBLite consensus disorder prediction 93 147 - -
Bisa04g0474 230 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0474 Bisa-ChrBisa04 8722167 8726306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0474 89 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 58.696 1.62e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa04g0474 HLH 0.00011 No_clan