Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0471 ATGTCTTTGCAAACTCTGAATTCTCCTGCTACAGCCTTCCCCTACAAGCAAGTCCACGAGGAAGAAGAAGAAGAAGACGACGAGATCGATCTTCACTGGGCCAAAGGGAAGCGCTCGAAACGACACCGTACCGACGAGGACGACACCTCGGACACGCCTTCCGAAGAAGAGTACCTCGCGCTCTGCCTCATCATGCTCGCTCACAGCGGCAACAAAAACGACAACGACAACAGCGCTGCCCCTGTACGACGTCGTTCGACAGACTCGGATTCGTCGTCGCCGATTGTTCATGCTTCTGAGAAGCTCTCTCATAAGTGTTCCGTCTGCAATAAGGCCTTTTCGTCTTATCAGGCTCTCGGTGGCCACAAGGCCAGCCACCGGAAGTCCACGGCGTCGGATTCCGCCGCAGCCGACAACGCCTCCGCCTCCGCAGCCTCCGGCGCCGGAAGGATGCACGAGTGCTCCATCTGTCACAAGGCTTTTCCGACCGGTCAGGCCCTGGGTGGTCACAAGAGGTGTCACTACGACGGCGGCAACGGGAACAAAACCAGCAGCAGCGGTGGTGCCGGTGCCAGCGCTGGTGTAATCTCGTCGGAGGGAGGCGTTGCTTCCACCGTGAGCCTCCGCGGATTTGACCTCAACCTGCCGGCCCCGTTGAGCGACTTCTCCCCGGTGGAACTCGGAGGCGGCGATGAGTTGACGGCGAAGAAGAATGTGAAAAGCGTGGAACAGGAGGTGGAGAGCCCGTTACCGGTAGTAGCCGGTAACAAGAGACCTCGGGCGTTTTTTAATGCGGAGCGTTCGACGACGTCGTTGCAGGATTGA 825 0.5867 MSLQTLNSPATAFPYKQVHEEEEEEDDEIDLHWAKGKRSKRHRTDEDDTSDTPSEEEYLALCLIMLAHSGNKNDNDNSAAPVRRRSTDSDSSSPIVHASEKLSHKCSVCNKAFSSYQALGGHKASHRKSTASDSAAADNASASAASGAGRMHECSICHKAFPTGQALGGHKRCHYDGGNGNKTSSSGGAGASAGVISSEGGVASTVSLRGFDLNLPAPLSDFSPVELGGGDELTAKKNVKSVEQEVESPLPVVAGNKRPRAFFNAERSTTSLQD 274
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0471 274 ProSitePatterns Zinc finger C2H2 type domain signature. 154 174 IPR013087 -
Bisa04g0471 274 Gene3D Classic Zinc Finger 101 174 - -
Bisa04g0471 274 SMART c2h2final6 104 126 IPR013087 -
Bisa04g0471 274 SMART c2h2final6 152 174 IPR013087 -
Bisa04g0471 274 SUPERFAMILY beta-beta-alpha zinc fingers 104 174 IPR036236 -
Bisa04g0471 274 MobiDBLite consensus disorder prediction 1 54 - -
Bisa04g0471 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 152 174 IPR013087 -
Bisa04g0471 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Bisa04g0471 274 MobiDBLite consensus disorder prediction 70 96 - -
Bisa04g0471 274 MobiDBLite consensus disorder prediction 30 49 - -
Bisa04g0471 274 Pfam C2H2-type zinc finger 104 128 - -
Bisa04g0471 274 Pfam C2H2-type zinc finger 152 176 - -
Bisa04g0471 274 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Bisa04g0471 274 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 38 217 IPR044653 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa04g0471 Bisa-ChrBisa04 8651154 8651978 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0471 1 263 C2H2 Transcription Factor Family AT1G27730 42.701 1.92e-50 164
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa04g0471 zf-C2H2_6 5.2e-12 CL0361