LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa04g0414	ATGGCGAAAGAGAAAAGGCAGTGTACAAGGAGAAGAAGAAACAAATATCAATCAGATGCCTTGTTGCACTACGTTTGTGAAGGTCGAAGAGTCTGTTGTGCGCTACTTGCCCAGCTGCAACTGAAAGCTCTTGCAGGATTTGCAGCAGCTGCAACTGGAGCAATGGCAATTAACCAGTCTTGGATGGCTGCTAATCAGGATCTTGCTATGGCATTGCTATTTGGAATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCCTTCAATAAAAGTGGAGTAGGACTGTTGATGGCTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCTTCAACTGATATAGCTGTTTCAGAGTTAACACATGCATCTGCCGAAGTCAGCGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAATTGATGCTCATCAAGGATTTAAGTTGGTTACTGACAATATAAAAACTCGAAAGCCATGCCTTCTCATTTGGGTGATTGGATTTGTCACTTTTTTTCTCAGTTCAGTCCTAGACAACCTGACATCTACTATAGTCATGGTTTCTCTGTTGCGGAAACTGGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGCTGTTGTCGTTATAGCTGAGAATGCTGGTGGTGCATGGACTCCGATTGGTGATGTTACCACTACTATGCTTTGGATACATGGCCATATATCTACTTGGCCAACAATGAAGGGGTTGTTTGTACCTTCCGCTATCTCTCTAGTTGTCCCTCTAGCTCTTATGTCCCTGACTAGTGAAGTTAATGGGAAGGGACAGGATTCTCCCAATGTCTTGGCATCTGAATTGATGGCACCACGAGGACAGCTTGTTTTCTCTGTGGGAATAGGTGCTTTGATTCTTGTCCCAGTGTTCAAGGCCCTCACAGGTTTACCTCCTTACATGGGAATGTTGCTTGGACTCGGTGTGCTTTGGATCCTCACTGATGCTATTCACTATGGTAAATCTGAAAGGCAGAAGCTAAAAGTACCACAGGCCTTGTCAAGGATAGATACTCAAGGAGCACTATTCTTCCTTGGAATTCTATTATCTGTTAACAGCCTTGAGGCAGCAGGGATTCTTCGGGAAATAGCAAATTACCTCGATGCTCATATTCCAAATCCTGAATTGATTGCATGTGCAATTGGAGTCATAACAGCAATAATAGACAGTGTTCCATTGGTTGCGGCAACAATGGGAATGTATGATCTCTCCACTTTCCCTCAGGATTCTGAGTTTTGGCAGCTGATTGCATTTTGTGCTGGTTCTGGTGGATCCATGTTAGTTATTGGCTCTGCTGCTGGAGTTGCATTCATGGGGATGGAAAAGGTGGACTTCGTTTGGTACTTACGGAAGGTTAGTGGGTTTGCTTTGGCAGGTTATGCTGCTGGTATTGCTATATACCTAGTAACTAGTAACCTTCACGTCACTTTACCCACAACTCTGGCTGAGCTTCCTTTTCTTTCTGGTTCATAA	1512	0.4365	MAKEKRQCTRRRRNKYQSDALLHYVCEGRRVCCALLAQLQLKALAGFAAAATGAMAINQSWMAANQDLAMALLFGIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDNIKTRKPCLLIWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAENAGGAWTPIGDVTTTMLWIHGHISTWPTMKGLFVPSAISLVVPLALMSLTSEVNGKGQDSPNVLASELMAPRGQLVFSVGIGALILVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGKSERQKLKVPQALSRIDTQGALFFLGILLSVNSLEAAGILREIANYLDAHIPNPELIACAIGVITAIIDSVPLVAATMGMYDLSTFPQDSEFWQLIAFCAGSGGSMLVIGSAAGVAFMGMEKVDFVWYLRKVSGFALAGYAAGIAIYLVTSNLHVTLPTTLAELPFLSGS	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa04g0414	503	NCBIfam	sodium:proton antiporter NhaD	95	459	-	-
	Bisa04g0414	503	Pfam	Citrate transporter	79	434	IPR004680	GO:0016020\|GO:0055085
	Bisa04g0414	503	PANTHER	SODIUM/PROTON ANTIPORTER 1-RELATED	38	503	IPR045016	GO:0006814\|GO:0015297

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa04g0414	Bisa-ChrBisa04	7682112	7694547	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa04g0414	57	503	Antiporters	AT3G19490	85.459	0.0	759