Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0378 ATGCCATCCGTATATGGGTCTTCTCAACCCGTCTTCCAAGCTCTCACTCAGAGCCACCGCACAGGATTTAGGGTTTTCTGCAAGTCGAGGTCGAGGGGGGCAGCACACAGCGCTGAAACAATGGCTCAGGCGCAGCCAGCAATCGAGCAGGTTCAGTGCTTCGGCCGCAAGAAGACTGCCGTCGCCGTCACTTACTGCAAGCGCGGCCGTGGACTCATCAAGATCAATGGCTGCCCAATCGAACTTGTAGAGCCTGAGATCCTCCGATTCAAGGCTTTCGAACCCATCCTCCTCTTGGGCAAACACCGTTTCGCCGGCGTCGACATGCGTATCCGTGTGAAGGGCGGTGGTCACACCTCTCAGATATACGCTATTCGCCAGAGCATCGCCAAAGCCCTTGTTGCTTTCTACCAGAAGTACGTAGACGAGCAGAGCAAGAAGGAGATCAAGGACATACTTGTCAGGTACGATCGAACCCTACTTGTCGCTGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTAGGTTCCAGAAATCATACCGTTGA 564 0.555 MPSVYGSSQPVFQALTQSHRTGFRVFCKSRSRGAAHSAETMAQAQPAIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0378 187 Pfam Ribosomal protein S9/S16 55 187 IPR000754 GO:0003735|GO:0005840|GO:0006412
Bisa04g0378 187 SUPERFAMILY Ribosomal protein S5 domain 2-like 50 187 IPR020568 -
Bisa04g0378 187 ProSitePatterns Ribosomal protein S9 signature. 115 133 IPR020574 GO:0003735|GO:0005840|GO:0006412
Bisa04g0378 187 PANTHER RIBOSOMAL PROTEIN S9 44 184 IPR000754 GO:0003735|GO:0005840|GO:0006412
Bisa04g0378 187 Gene3D - 40 187 IPR014721 -
Bisa04g0378 187 FunFam 40S ribosomal protein S16 42 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0378 Bisa-ChrBisa04 6897346 6897909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0378 44 187 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 89.583 3.16e-95 271