Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0374 ATGTCTCGTAAGGAAGAAGATCAAGCCCAGTTGTTGTGGGAAGAGAACCAATCATGGGGTCTCTCCAATTCCGATTACAACTCTCCAGAAAGCCAACACCAAGCAGTCTCTATTCCCATCATAGGAGGCCCTTCTCATAATAACAATAATGGCAATAACAATAACATTAATGATCACCTGAAAGAAGGAGATGAAGAAGAAGAGGAAGAAGGAGGAGGAGGAAGGAATATGATGGAAGGTGGTGATAACAAAACGGCATTGTCGTCGAAGAAGAGAAACCGAGGAGGAGGAAAGAAGAGAAGAGGAAGCAGTGGTGAATTTGAGGATCATGAGGTACACATTTGGACGGAGAGAGAGAGGAGGAAGAAGATGAGGAACATGTTCTCTAGCCTCCATGCTTTGCTTCCTCAACTTCCTTCCAAGGCTGACAAATCAACCATTGTTGACGAAGCAGTGACCTACATCCAAAGCTTACAGAACACTCTCAAGAAGCTTCAAATACAAAAACTGGAAAGGCTTCAAAAACTCACCTCGCAGTCCCAATATCATCCCTATGGCTCATCAAGGGAGGCATTCATGGCAGATCAAGGATCTTCCATGAATAATAATATTAATCATTCCTCCAACAACAACGCCAGTATTAATGTTGGACCTTCAAATCCTTCAACTTCACTCTCAGTTCCGAGAATGTATAATAATAACAACAATCCCACAGGGTTTCAGACTTGGAGTTGTCCGAATATGGTGTTGAACATTTGTGGGGAGGAAGCTCAGTTCAGTGTGTGCTGCCCCAAGAAGCCAGGTCTCTTCACCAGCGTCTGTTATGTGCTTCAGAAGTACAAGATCGAGGTTTTGTCTGCTCATGTTTCATCTGATAATCATCGAAGCATGTTCATGATTCAAACACAGAGAAGCGCAGAAATGAATCATGGCATGGGCTACCTTGAACAAGATCGTGCAATTTACAAACTGAAAATGTTTTTTTTTTTCACAATAACCTTTACGTACAAGGGAAGAGAAAAATTTACATACGCAATTACAGGTCTATTTACCAATCTAAACCTCAAAATTCACAATGGTTATGCTCTGTTTTGA 1095 0.4164 MSRKEEDQAQLLWEENQSWGLSNSDYNSPESQHQAVSIPIIGGPSHNNNNGNNNNINDHLKEGDEEEEEEGGGGRNMMEGGDNKTALSSKKRNRGGGKKRRGSSGEFEDHEVHIWTERERRKKMRNMFSSLHALLPQLPSKADKSTIVDEAVTYIQSLQNTLKKLQIQKLERLQKLTSQSQYHPYGSSREAFMADQGSSMNNNINHSSNNNASINVGPSNPSTSLSVPRMYNNNNNPTGFQTWSCPNMVLNICGEEAQFSVCCPKKPGLFTSVCYVLQKYKIEVLSAHVSSDNHRSMFMIQTQRSAEMNHGMGYLEQDRAIYKLKMFFFFTITFTYKGREKFTYAITGLFTNLNLKIHNGYALF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0374 364 MobiDBLite consensus disorder prediction 41 57 - -
Bisa04g0374 364 Pfam Helix-loop-helix DNA-binding domain 113 159 IPR011598 GO:0046983
Bisa04g0374 364 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 2 307 IPR044278 GO:0003700|GO:0006355|GO:0009960
Bisa04g0374 364 Coils Coil 148 175 - -
Bisa04g0374 364 CDD ACT_UUR-ACR-like 258 303 - -
Bisa04g0374 364 Gene3D - 105 175 IPR036638 GO:0046983
Bisa04g0374 364 MobiDBLite consensus disorder prediction 12 35 - -
Bisa04g0374 364 MobiDBLite consensus disorder prediction 1 108 - -
Bisa04g0374 364 SUPERFAMILY ACT-like 254 307 IPR045865 -
Bisa04g0374 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 158 IPR011598 GO:0046983
Bisa04g0374 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 111 179 IPR036638 GO:0046983
Bisa04g0374 364 MobiDBLite consensus disorder prediction 204 230 - -
Bisa04g0374 364 CDD bHLH_AtbHLH_like 113 166 IPR045239 -
Bisa04g0374 364 SMART finulus 116 164 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0374 Bisa-ChrBisa04 6836661 6846994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0374 9 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 36.950 2.00e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa04g0374 HLH 3.1e-10 No_clan