Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0373 ATGCCTGGGAGCTTAGAGCCGTTGGATTTGGGGGTTCAGATTCCATACCACTTCAGGTGTCCGATCTCCCTCGAGCTCATGCGCGACCCCGTCACCGTCTGCACCGGTCAGACCTACGACCGCCCCAGCATCGAGTCATGGGTCGCCACCGGCAACACCACCTGCCCCGTCACTCGGGCTCCCCTCACCGATTTCACTCTTATTCCCAATCACACTCTTCGCCGCCTTATCCAAGACTGGTGCGTCGCTAACCGGGCTTTCGGAATTGAGCGTATCCCTACTCCCAAACAACCCGCAGACCCAACCTTGGTTCGTTCCTTGCTCAACCAAGCCTCCTCCGTGTCGGCTCCGATTCAGTCTCGGCTCTCTGCTCTGCGTCGACTCAGAGGACTCGCTCGTGACTCGGACAATAATCGTTCCCTCATTGGCTCTCACAACGTCCGCGAAATCCTTCTCCATATTGTTTTCTCCAATCTCGATTCTGATTCCTCCGAGTTTAATCACGAGTCGCTCGCCCTGCTGGTGATGTTTCCGCTCTCCGAGTCGGAATGTACCTCCGTCGCATCGGATCCAGTTAAAATCCGCTACCTATCGCGTCTGCTGTTTCATACTTCCATCGACGTCCGAATCAACTCGGCCGCGCTCATTGAAATCGTCGCGGCGGGGACTAGAGCGTCGGAGCTCCGATCTGAAATCAGCAGCATCGACGAAATCTACGACGGAGTCATCGACATTTTGAAGAATCCGATCGCGTATCCCCGCGCTCTCAAGATCGGAATCAAGGCGCTGTTTGCTCTGTGCTTGGTGAAACAGACGCGGCACAAAGCGGTCGAAGCCGGAGCGCCGGAGATCCTCATTGACCGACTGGCCGATTTTGAGAAATGCGACGCGGAGAGAGCTCTGGCGACGATCGAACTTATCTGCCGGATCCCGGCCGGGTGCGCGGCGTTTGCAGAGCACGCGCTGACGGTGCCGCTGCTGGTGAAGATAATCCTGAAGATATCGGACCGCGCGACGGAGTACGCGGCCGGAGCCCTGCTGTCGCTGTGCTCGGAATCGGAAAGTTGCAAGAGGGAGGCGGTGGCGGCGGGGGTGCTGACTCAGCTGCTGCTGCTGGTACAGAGCGATTGCACGGCGAGAGCGAAGAGGAAGGCGCAGCTGTTGCTGAAGCTTCTTCGGGATTCGTGGCCGCAACAAGATTCCCTCGCAAACTCGGACGATTTTGCATGCAGCGAAGTCGTACCGTTTTGA 1251 0.5771 MPGSLEPLDLGVQIPYHFRCPISLELMRDPVTVCTGQTYDRPSIESWVATGNTTCPVTRAPLTDFTLIPNHTLRRLIQDWCVANRAFGIERIPTPKQPADPTLVRSLLNQASSVSAPIQSRLSALRRLRGLARDSDNNRSLIGSHNVREILLHIVFSNLDSDSSEFNHESLALLVMFPLSESECTSVASDPVKIRYLSRLLFHTSIDVRINSAALIEIVAAGTRASELRSEISSIDEIYDGVIDILKNPIAYPRALKIGIKALFALCLVKQTRHKAVEAGAPEILIDRLADFEKCDAERALATIELICRIPAGCAAFAEHALTVPLLVKIILKISDRATEYAAGALLSLCSESESCKREAVAAGVLTQLLLLVQSDCTARAKRKAQLLLKLLRDSWPQQDSLANSDDFACSEVVPF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0373 416 Gene3D - 89 409 IPR011989 -
Bisa04g0373 416 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
Bisa04g0373 416 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Bisa04g0373 416 SUPERFAMILY RING/U-box 12 90 - -
Bisa04g0373 416 PANTHER WDSAM1 PROTEIN 12 400 IPR045185 GO:0061630
Bisa04g0373 416 CDD RING-Ubox_PUB 15 67 IPR045210 -
Bisa04g0373 416 FunFam RING-type E3 ubiquitin transferase 8 90 - -
Bisa04g0373 416 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Bisa04g0373 416 SUPERFAMILY ARM repeat 117 392 IPR016024 -
Bisa04g0373 416 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0373 Bisa-ChrBisa04 6835325 6836575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0373 1 416 U-box Gene Family AT3G19380 68.558 0.0 574