Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0371 ATGTTCAGCGGAATTGCCTTCTTATTTGGATTGTTGGCATTTCTGGGAATGCAGCTTCGTGTAATAATGGCTGATTGCCCTTTGGATTTTAGCGGTTCAAACTTTACACTAGCATCCTCTTTATGCTCTAACCAGGGTGACAGGGGAAAATGTTGCCGCTTCATTAATGCTAACATTGCAGTTTCTGTTTCTCGTTTTGCAAATGCAACAAGAAACCTAGGAGTCGCCCAAAATGCTTCTGAACTTTGTCTCGAGGCCATATCTCGGACTTTGCAACTTTATGGAGTTCCACGAAATACAACAGTTTTCTGTGGTTTTGGGACAAAAATTCCAGTTAATTATGAGTGTGAGGGTCGAACTACGGTCACACAGATGCTGCATTCTCCAAGATTTGTGGAGGTCATGGAAAATTGCAAGGTGCCACTTGCGGGGGAAAGTAAATGCAAGAAGTGCTTAAATGCTGGCGTCAGTTATCTGCATCATCTAATGGGAATTGAAGATAATATAACGCTTAGCACATGCCGTGATGCTGCCTTTGCAGCACTGGCAAGCCAAGTTGATGAGAAATCTACAATTGACATCGCGAGCTGTTTCTTTGGGGTTCAAGGACTTCTTGTGCCGCCTGCTTCAGAGCCATCTTCATCATCACCGACTCCCGAGGCTTCTCCTGGTCCACTGGTTGCTGATAGCCCTAGTCAATCATTGTTAGGTGTGCCTCTTAAGGAAAAGCACCATTCATACCACTTGACACTAATTCCAGGTATTGGGATAGCCGTCACAGCTGTTGCTGCAATGATGCTCTTAGTCTTGATAGTTCTAATTCGTCAAAAAAGCCGAGAACTAGAGGTGCCTTATAATTTAAGAAAAACCTCTTCAAAAGCCTTACCTTCTTGTGCAATGTGGAAATTTCAGGAAGGTCCTTCATCTATATTCCGAAAATTCAGCTACAGGGAGATAAAGAAGGCAACAGAGGATTTCAGCACTATCATTGGGCAAGGGGGATTTGGAACAGTGTATAAAGCTCATTTTAGTGATGATCAAGTGTTAGCAGTGAAGCGAATGAACAAAGTGTCAGGGCAAGGGGAGGATGAGTTTTGCAGAGAGATAGAGCTTCTTGCTCGGTTGCATCATCGGCATCTTGTTGCGTTAAGAGGATTTTGCGTTAAAAATCATGAGAGGTTTCTGATGTACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAAGAACCCTCTAAGTTGGCGAACTAGAATCCAAATTGCCATTGATGTGGCTAATGCTCTGGAGTACCTTCATTGCTATTGTGATCCTCCTCTGTGGCATAGAGACATCAAGTCTAGCAATATTTTACTGGATGAGAATTTTGTTGCTAAGTTAGCTGATTTTGGCCTTGCACATGCTTCAAAAGATGGTTCCATATGCTTTGAAGCTGTAAGCACCGATATCCGGGGAACTCCAGGTTATATGGATCCCGAATATATGGTTACTCAAGAGCTCACCGAAAAAAGCGATATTTACAGTTTTGGGGTGCTATTACTGGAAATTGTGACCGGAAGACGAGCAATTCAAGAAACTAAGAATCTGGTAGAATGGGCACAACCATACATGGGACCGGATTCAATAACGAGATCGATGGAGTTGGTGGATCCTAATGTGAGGGAGTCTTTTGACTTGGATCAACTTCAGACAGTTGTGTCTATAGTAGAATGGTGCGCACATAGAGAAAGCAGGAAAAGGCCTTCAATAAGGCAAGTCCTTAGGCTTCTTTATGAGGCTTCAGAACCTATGCACAGTGAGTTTTTACAAGCTGGTCTAGATGAAGAATGTGAAGGGAATCGGGAGAGTGGCAGAAGAAGCAAGGGGAAAGTGCATAGAAATGAAGCATTTTTGCAGAGTGTAGATGGAAGATATCTTGCTTCTTCTTCAAGTACATCAACCTATTGCAGTAGAAGCTTTTTACTTGAGACAGGCTCTCCCCAGTCTCCTTTAAATATATATTCTCCGTCTAAGGCAAATCAAGTTTGA 2040 0.4279 MFSGIAFLFGLLAFLGMQLRVIMADCPLDFSGSNFTLASSLCSNQGDRGKCCRFINANIAVSVSRFANATRNLGVAQNASELCLEAISRTLQLYGVPRNTTVFCGFGTKIPVNYECEGRTTVTQMLHSPRFVEVMENCKVPLAGESKCKKCLNAGVSYLHHLMGIEDNITLSTCRDAAFAALASQVDEKSTIDIASCFFGVQGLLVPPASEPSSSSPTPEASPGPLVADSPSQSLLGVPLKEKHHSYHLTLIPGIGIAVTAVAAMMLLVLIVLIRQKSRELEVPYNLRKTSSKALPSCAMWKFQEGPSSIFRKFSYREIKKATEDFSTIIGQGGFGTVYKAHFSDDQVLAVKRMNKVSGQGEDEFCREIELLARLHHRHLVALRGFCVKNHERFLMYEYMENGSLKDHLHSPGKNPLSWRTRIQIAIDVANALEYLHCYCDPPLWHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEAVSTDIRGTPGYMDPEYMVTQELTEKSDIYSFGVLLLEIVTGRRAIQETKNLVEWAQPYMGPDSITRSMELVDPNVRESFDLDQLQTVVSIVEWCAHRESRKRPSIRQVLRLLYEASEPMHSEFLQAGLDEECEGNRESGRRSKGKVHRNEAFLQSVDGRYLASSSSTSTYCSRSFLLETGSPQSPLNIYSPSKANQV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0371 679 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Bisa04g0371 679 SMART serkin_6 324 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0371 679 MobiDBLite consensus disorder prediction 209 228 - -
Bisa04g0371 679 FunFam Putative receptor-like protein kinase 292 399 - -
Bisa04g0371 679 CDD STKc_IRAK 330 594 - -
Bisa04g0371 679 Pfam SPARK 25 166 IPR043891 -
Bisa04g0371 679 Pfam Protein kinase domain 328 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0371 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Bisa04g0371 679 Gene3D Phosphorylase Kinase; domain 1 289 399 - -
Bisa04g0371 679 PANTHER OS01G0750732 PROTEIN 168 622 - -
Bisa04g0371 679 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Bisa04g0371 679 SUPERFAMILY Protein kinase-like (PK-like) 308 596 IPR011009 -
Bisa04g0371 679 ProSiteProfiles Protein kinase domain profile. 324 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0371 679 FunFam Putative receptor-like protein kinase 400 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0371 Bisa-ChrBisa04 6796135 6800142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0371 24 669 Receptor kinase-like Gene Family AT3G19300 60.337 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Bisa04g0371 Pkinase 5.6e-51 CL0016