Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0370 ATGTCCAGGCCAATTCTGGTAGATTCAATATTATTCCCAAATAGACGCGAAGAGTGGATCTTCTGGATTTATGTCGGTGATGGCGTAATTAGCATACCATCCATTCCTGTTGATATTGAATTGCAGGCTGTTCGTTTCTCATTATTTGGGGAGTTTCAGATTTGGGACTTCTTATTTTATAGAGAAGTAATGGCTACCCCAAGTAAATCAACTTCAAAGGTATCTTTAGACCCCTTGGAACAGAAGGGAAAAAATACGGTTGAATCAAATGCCATGCTTCAATGTCCTTCAAACCAGCAACCTCGTAGCTTCTTGGATGGCCCAGTAGCTATTCTTTGGGATATTGAAAATTGTCCAGTTCCCAGTGATGTTCGCCCTGAAGATGTAGCCGGTAACATACGAATGGCTTTGAGGGTGCACCCAATAATCAAAGGAGCTGTTATGATGTTTTCTGCTTATGGGGATTTTAATGCCTTCCCCAGGCGACTCAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTCATTGATGTTCCCAATGGGAGAAAGGATGCTGCTGACAAAGCTATCTTGGTGGACATGTTCTTGTTTGCCCTTGACAACCCTCCACCTTCCTCTATCATGCTGATATCTGGAGATGTGGATTTTGCTCCAGCACTTCACATTCTTGGTCAACGGGGATATACTGTAATTCTTGTAATCCCTGCTGGAGTTGGTGTTTCATCTGCCCTAAGTAATGCAGGTAAATTTGTCTGGGACTGGCCTAGCGTGGCTCGCGGAGAAGGCTTTGTGCCACCCTCAAAGGCTTTAGTGCCACCACATGTGGGTCCAACTGAGGTTTCTGGATATATGATGGGATTCCATATTAATGACATTGTCCATGGACTAAATGAAGAAGAAGCAATAGTTTACAAAGGAATGTCACAGAGCTATTATAACTCCAGGGATTTCTCAGTTGTGTCACAATCGTTGTCTGAATACAACAGTAGTTCATTAAATGGGTCCTTTGTTCCAACAACTTTGAGGTCACATAGCCTTCCATCTGGATTGAATGATGTTTCAGGAGGACCTATGTCATCTAGCGACCTAAATGAATGCCCATTGTGGGTACAACCTGGGGATTTAAATGGTCTCAAGGGCCAGTTGGTAAGGTTGCTTGAACTTTCTGGAGGTTGCCTGCCTCTGAACCGAGTTCCAGCAGAGTACCTGAAACTTTTTGGAAGGCATCTTTATGTATCAGAATATGGGGCATTCAAGTTAGTAAATCTTTTCAAGAAGATGGATGACACCATGGCTGTGGAAGGGAAAGGAAATAGAAAGTTTGTGCATCTTCGAAACTGGAAAGCAAGCCCAAGTGCACCTCCTCTGCCTCTGACACAGAAAGATAAGAAAGGAAGGGGGCCTCAGGAAGAGAATGTGGATGTTGTGACGGGTGGATGCTCTTCAGATGAGTACTCAGATGAAGACAGAATAGTTATTGAAGAGCAGAATGAGAGAAGTGGCATAGGAAAGGGTCGTAAGGGGAAAGCATCCAGATGTGAAATTGATGACATTCTTGAGCAGTTCAAGTATGAACTACAGGAGATTCTTGTCAGTTATTCTTGCCGAATATTCCTAGGTTGTTTTGAAGCAATATACCAGCAACGGTACAAGAAACCACTGGACTATCGGAGACTTGGTGTGGGCAAGTTGGAGGATTTGCTTGAGAAATTGAGTGATGTGGTAGTATTGCATGAAGAACCAGTGAGCCACAGGAAGTTCTTGGCTGCTGTTGGTGGGTAG 1779 0.4379 MSRPILVDSILFPNRREEWIFWIYVGDGVISIPSIPVDIELQAVRFSLFGEFQIWDFLFYREVMATPSKSTSKVSLDPLEQKGKNTVESNAMLQCPSNQQPRSFLDGPVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPIIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPAGVGVSSALSNAGKFVWDWPSVARGEGFVPPSKALVPPHVGPTEVSGYMMGFHINDIVHGLNEEEAIVYKGMSQSYYNSRDFSVVSQSLSEYNSSSLNGSFVPTTLRSHSLPSGLNDVSGGPMSSSDLNECPLWVQPGDLNGLKGQLVRLLELSGGCLPLNRVPAEYLKLFGRHLYVSEYGAFKLVNLFKKMDDTMAVEGKGNRKFVHLRNWKASPSAPPLPLTQKDKKGRGPQEENVDVVTGGCSSDEYSDEDRIVIEEQNERSGIGKGRKGKASRCEIDDILEQFKYELQEILVSYSCRIFLGCFEAIYQQRYKKPLDYRRLGVGKLEDLLEKLSDVVVLHEEPVSHRKFLAAVGG 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0370 592 ProSiteProfiles OST-type HTH domain profile. 517 591 IPR025605 -
Bisa04g0370 592 CDD LOTUS 518 580 - -
Bisa04g0370 592 Pfam OST-HTH/LOTUS domain 517 580 IPR025605 -
Bisa04g0370 592 Pfam OST-HTH/LOTUS domain 375 440 IPR025605 -
Bisa04g0370 592 ProSiteProfiles OST-type HTH domain profile. 373 445 IPR025605 -
Bisa04g0370 592 MobiDBLite consensus disorder prediction 451 481 - -
Bisa04g0370 592 CDD LOTUS 374 443 - -
Bisa04g0370 592 Gene3D - 106 254 - -
Bisa04g0370 592 Gene3D - 512 583 IPR041966 -
Bisa04g0370 592 Gene3D - 373 442 IPR041966 -
Bisa04g0370 592 PANTHER LIMKAIN B LKAP 93 550 IPR024768 GO:0005777|GO:0010468
Bisa04g0370 592 CDD PIN_limkain_b1_N_like 108 234 - -
Bisa04g0370 592 Pfam NYN domain 108 247 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0370 Bisa-ChrBisa04 6791728 6795413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0370 104 259 C2H2 Transcription Factor Family AT5G61190 40.385 1.19e-27 116