LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa04g0369	ATGGTTGAATCAAGCTCCTTGGATGGCCCAGTAGCTATTCTTTGGGATATTGAAAATTGTCATGTTCCCAGTAATGTTCACCTTGAAGATGTAGTCGGTAACATAAGAATGGCTTTGAGGGTGCACCCAATAATCAAAGGAGCTGTTATGATGTTTTCTGCTTATGGGGATTTTAATGCCTTCTCCAAGCGACTCAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTCATTGATGTTCCTAATAGGAGAAAGGATGCTGCTGACAAAGCTATCTTGGTAGACATGTTCTTGTTTACCCTTGACAACCCTCCACCTTCCTCTATCATGCTGATATCTGGAGATGTGGATTTCGCTCCGGTACTTCACATTATTGGTCAACGGGGATATACTATAATTCTTCTAATCCCTGCTGGAGTTGGTGTTTCATCTGCCCTAAGTAATGCAGGTAAATTTGTCTGGGACTGGCCTAGTGTGGCTCGCAGAGAAGGCTTTGTGCCATCCTCAAAGGCTTTAGTTCCAACACGTGTGGGTTCAACTGAGATTTCTGGATATACGATGGGATTCCATATTAATGACAATGCCCATGGACTAAATGAAGAAGAAGGAAAAGTTTACAAAGGAATCTCACAGAGCTATTATAACGCTAGGGATTTTTCAGTTTTGTCTGAATACAATAGTTCATTAAATGGGTCCTCTGTTCCAACAACTTTGAGGTCACATAGTCTTCCATTTGGATTGAATGATGTTTCAGGAGGACCTATGTCTTCTAGCAACCAATATGAATGCCCATTGTGGGTACAAGCTGGGGATTTAAATAGGTCCTATGTTCCAACAACTTTGAGGTCACATAGCCTTCCATGTGGATTGAATGATATTTTGGGAGGACCTATGTCTTCTAGTGACCAAAATGAATGCCAATTGTGGGTACAACCTGGGGATTTAAATGGGTCCTCTGTTCCAACAACTTTGAGGTCACATAGCCTTCCATCTGGATTGAATGATGTTTCAGGAGGACCCATGTCTTCTAGCGACCAAAGTGAATGCCCATTGTGGGTACAACCTGGGGATTTAAATGGTCTCAAGGGCTAG	1089	0.4252	MVESSSLDGPVAILWDIENCHVPSNVHLEDVVGNIRMALRVHPIIKGAVMMFSAYGDFNAFSKRLREGCQRTGVKLIDVPNRRKDAADKAILVDMFLFTLDNPPPSSIMLISGDVDFAPVLHIIGQRGYTIILLIPAGVGVSSALSNAGKFVWDWPSVARREGFVPSSKALVPTRVGSTEISGYTMGFHINDNAHGLNEEEGKVYKGISQSYYNARDFSVLSEYNSSLNGSSVPTTLRSHSLPFGLNDVSGGPMSSSNQYECPLWVQAGDLNRSYVPTTLRSHSLPCGLNDILGGPMSSSDQNECQLWVQPGDLNGSSVPTTLRSHSLPSGLNDVSGGPMSSSDQSECPLWVQPGDLNGLKG	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa04g0369	362	Pfam	NYN domain	10	149	IPR021139	GO:0004540
	Bisa04g0369	362	Gene3D	-	5	156	-	-
	Bisa04g0369	362	MobiDBLite	consensus disorder prediction	316	362	-	-
	Bisa04g0369	362	CDD	PIN_limkain_b1_N_like	10	136	-	-
	Bisa04g0369	362	MobiDBLite	consensus disorder prediction	316	349	-	-
	Bisa04g0369	362	PANTHER	LIMKAIN B LKAP	8	219	IPR024768	GO:0005777\|GO:0010468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa04g0369	Bisa-ChrBisa04	6706321	6707409	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa04g0369	2	159	C2H2 Transcription Factor Family	AT5G61190	37.975	3.89e-23	99.4