Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0357 ATGTCACTGTCTCGGGCGCTCGTCTGCCCGCAGCGTCCATCAAGGCCACCGTCCACTGGAAACCTTAGGACTTCCCCTTTAAAAATAGAGACGCGCGACCACCCACATGTTATCCAAAACCACTTCAAACCCGTGTGTAAATGGTGTGCAAGCTGGAACTTACCATGCCACGTCACTCCCAAACCGTATATATACCAAACCCCCTCCCTCTCTCTCCTCAATGAATGCGCCAACAACTTCCCTCCTTCATTCGCTACGCTCACTCTTCCAGCACTCTTTCCGTTTCAAATCATGATGTCATCTTCCAAACGATCCAGACTCGCCGGACCTCCCTCCTTCTCCTCCTCGCTGTCTCCGCCTCGCCTCACCCGCGACCAGGAACTTTCAGTCATTGTCAATGCACTCACCAACGTCGTCGCAGGCTCCACCCCCGACCTCTCCTCATGCGATTTCCTCTTACCTCCCTCCTCCGTCGCCGCAGATGGCCCCAGCTTCGACCCAGGCTACCACGCGGCCTCCCCCGGGACTTCCAAGACGTGCCACGGATGCGGGATCGTGGGATGCTTGGGCTGCAAATTCTTCCCGGAGGAGAAGAAGAAGCAGAAGGAAATCAAGAGGGCGAAGAAGAAATACAGGGGAGTGAGACAGAGGCCGTGGGGGAAATGGGCGGCGGAGATCCGAGACCCTAGAAGCGCGACGCGGGTGTGGCTAGGAACGTTCAACACGGAGGAGGAAGCAGCTCGCGCGTACGATAAAGCGGCGATCGAATTCCGAGGACCCCGAGCGAGGCTCAATTTTCCGTTCACGGACGACTCGCTGGTGATCGGATCTCAGGGGAATCAGCAGCCAGAATCTTCAGCAATGGCGGCTGGAAGTGGGTCGGAGCATGGGTATCAGGAGGATCCGAACGCGGCCAAGGAAGCGATGCTGTTTAGTGATAAGGAATGTGAGTTCTGGGATAGGATCGGAGAAGCCGATTGGGAGCAGATGATGATGGATTTCGCCGTCGGAGATTCGTCGGACTCTGGTCCTGTAACTACTCAGAGTTGGTGA 1053 0.5641 MSLSRALVCPQRPSRPPSTGNLRTSPLKIETRDHPHVIQNHFKPVCKWCASWNLPCHVTPKPYIYQTPSLSLLNECANNFPPSFATLTLPALFPFQIMMSSSKRSRLAGPPSFSSSLSPPRLTRDQELSVIVNALTNVVAGSTPDLSSCDFLLPPSSVAADGPSFDPGYHAASPGTSKTCHGCGIVGCLGCKFFPEEKKKQKEIKRAKKKYRGVRQRPWGKWAAEIRDPRSATRVWLGTFNTEEEAARAYDKAAIEFRGPRARLNFPFTDDSLVIGSQGNQQPESSAMAAGSGSEHGYQEDPNAAKEAMLFSDKECEFWDRIGEADWEQMMMDFAVGDSSDSGPVTTQSW 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0357 350 PRINTS Ethylene responsive element binding protein signature 233 249 IPR001471 GO:0003700|GO:0006355
Bisa04g0357 350 PRINTS Ethylene responsive element binding protein signature 211 222 IPR001471 GO:0003700|GO:0006355
Bisa04g0357 350 MobiDBLite consensus disorder prediction 273 301 - -
Bisa04g0357 350 Pfam AP2 domain 210 259 IPR001471 GO:0003700|GO:0006355
Bisa04g0357 350 Gene3D AP2/ERF domain 209 268 IPR036955 GO:0003700|GO:0006355
Bisa04g0357 350 MobiDBLite consensus disorder prediction 273 289 - -
Bisa04g0357 350 SUPERFAMILY DNA-binding domain 210 268 IPR016177 GO:0003677
Bisa04g0357 350 PANTHER DNA-BINDING DOMAIN 179 294 IPR044808 GO:0003700|GO:0009873
Bisa04g0357 350 FunFam Ethylene-responsive transcription factor 2 209 268 - -
Bisa04g0357 350 CDD AP2 209 267 IPR001471 GO:0003700|GO:0006355
Bisa04g0357 350 MobiDBLite consensus disorder prediction 1 26 - -
Bisa04g0357 350 SMART rav1_2 210 273 IPR001471 GO:0003700|GO:0006355
Bisa04g0357 350 ProSiteProfiles AP2/ERF domain profile. 210 267 IPR001471 GO:0003700|GO:0006355
Bisa04g0357 350 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0357 Bisa-ChrBisa04 6457169 6458221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0357 98 270 AP2-EREBP Transcription Factor Family AT4G34410 42.233 4.31e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa04g0357 AP2 8.2e-16 CL0081