Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0356 ATGTCATCTCCCAAACAATCCAGACTCGCCGGACCTCCCTCCTCCTCCTCCTCCTCGCTGTCGCCGCCTCGCCTCACTCGCGACCAGGAACTTTCAGTCATTGTCAATGCACTCACCAACGTCGTCGCAGGCTCCACCCCCGACCTCTCCACATGCGATTTCCTCTTACCTCCCTCCTCCGTCGCCGCAGGTGGCCCCAGCTTCGACCCCGGCTACCACGCGGCCTCCGCCGGGACTTCCAAGACGTGCCACGGATGCGGGATCGCGGGATGCTTGGGCTGCAAATTCTTCCCGGAGGAGAAGAAGAAGCAGAAGGAAATCAAGAGGGCAAAGAAGAAGTACAGGGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATCCGAGACCCGAGACGCGCGACCCGGGTGTGGCTGGGAACATTCAACACGGAGGAGGAAGCAGCTCGTGCGTACGATAAAGCGGCGATCGAATTCCGTGGACCCCGAGCGAGGCTCAATTTTCCGTTCACTGACGACTCGCTGGTGGTCGGATCTCAGGGGAATCAGCAGCCAGAATCTTCAGCAATGGCGGCTGGAAGTGGGTCGGAGCATGGGTATCAGGAGGATCCGAACCCGGCAAAGGAAGCGATGCTGCTTAGTGATAAGGAATGTGAGTTCTGGGATAGGATCGGAGAAGCCGATTGGGAGCAGCTGATGATGGATTTCGGCGCCGGAGATTCGTCGGACTCTGGTCCTGTAACTACTCAGAGTTGGTGA 762 0.5945 MSSPKQSRLAGPPSSSSSSLSPPRLTRDQELSVIVNALTNVVAGSTPDLSTCDFLLPPSSVAAGGPSFDPGYHAASAGTSKTCHGCGIAGCLGCKFFPEEKKKQKEIKRAKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTEEEAARAYDKAAIEFRGPRARLNFPFTDDSLVVGSQGNQQPESSAMAAGSGSEHGYQEDPNPAKEAMLLSDKECEFWDRIGEADWEQLMMDFGAGDSSDSGPVTTQSW 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0356 253 FunFam Ethylene-responsive transcription factor 2 112 171 - -
Bisa04g0356 253 Coils Coil 100 120 - -
Bisa04g0356 253 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Bisa04g0356 253 SUPERFAMILY DNA-binding domain 113 171 IPR016177 GO:0003677
Bisa04g0356 253 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Bisa04g0356 253 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Bisa04g0356 253 MobiDBLite consensus disorder prediction 1 26 - -
Bisa04g0356 253 CDD AP2 112 170 IPR001471 GO:0003700|GO:0006355
Bisa04g0356 253 MobiDBLite consensus disorder prediction 176 192 - -
Bisa04g0356 253 Gene3D AP2/ERF domain 112 171 IPR036955 GO:0003700|GO:0006355
Bisa04g0356 253 PANTHER DNA-BINDING DOMAIN 82 197 IPR044808 GO:0003700|GO:0009873
Bisa04g0356 253 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Bisa04g0356 253 MobiDBLite consensus disorder prediction 176 210 - -
Bisa04g0356 253 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0356 Bisa-ChrBisa04 6444457 6445218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0356 24 180 AP2-EREBP Transcription Factor Family AT4G34410 45.789 3.79e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa04g0356 AP2 3.7e-16 CL0081