Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0355 ATGTCATCTCCCAAAAGATCCAGACTCGCCGGACCTCCCTCCTCGCCGTCGCCGCCTCGCCTCACCCGCGACCAGGAACTTGCCGTCATTGTCGCTGCACTCACCAACGTCGTCGCAGGATCGGAACCCGACGACCTCGCCTCATGCGATTTCCTCTTGCCCTCCTCCTCCGTCGCCGCAGGTGGCCCCAGCCTCGACTCCGGCTGCCACGCTGTCTCCGCCGGGACTTCCGAGAAGTGCCACGAATGCGGGATCGCGGGATGCTTGGGCTGCAAATTCTTCCAGGAGGAGAAGAACAAGGAGAAGGAAATCAAGAGGGCGACTAAGAAGTACAGGGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATCCGAGACCCGCGACGAGCGGTCCGGGTATGGCTGGGCACGTTCAACACGGCGGAGGAGGCCGCTCGCGCGTACGATAAAGCGGCGATCGAGTTCCGTGGGCCCCGGGCGAAGCTCAATTTTCCATTCTCAGATGACTCGCTGGTGATCGCATCTCAGGGGAATCAGCAGCCGGAATCTTCAGCAATGGCTGCTGGGAGTGGGTCGGAGCAGGGGTATCGAGAGAATCCGAACCCGGCATCGGAAGCGATGCTGTTCAATGACAAGGAAAGTGAGTTCTGGGATAGGATCGGAGAAGCCGAATGGGAGCAGCTGAAGATGGTTTTCGCGGCCGGAGATTCGTCGGACTCTGGTCCTGTAACTACTCAGACTTGA 750 0.6067 MSSPKRSRLAGPPSSPSPPRLTRDQELAVIVAALTNVVAGSEPDDLASCDFLLPSSSVAAGGPSLDSGCHAVSAGTSEKCHECGIAGCLGCKFFQEEKNKEKEIKRATKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFNTAEEAARAYDKAAIEFRGPRAKLNFPFSDDSLVIASQGNQQPESSAMAAGSGSEQGYRENPNPASEAMLFNDKESEFWDRIGEAEWEQLKMVFAAGDSSDSGPVTTQT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0355 249 Coils Coil 97 117 - -
Bisa04g0355 249 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Bisa04g0355 249 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
Bisa04g0355 249 MobiDBLite consensus disorder prediction 179 206 - -
Bisa04g0355 249 MobiDBLite consensus disorder prediction 179 201 - -
Bisa04g0355 249 Gene3D AP2/ERF domain 109 168 IPR036955 GO:0003700|GO:0006355
Bisa04g0355 249 SUPERFAMILY DNA-binding domain 110 169 IPR016177 GO:0003677
Bisa04g0355 249 CDD AP2 109 167 IPR001471 GO:0003700|GO:0006355
Bisa04g0355 249 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Bisa04g0355 249 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Bisa04g0355 249 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Bisa04g0355 249 FunFam Ethylene-responsive transcription factor 2 109 168 - -
Bisa04g0355 249 MobiDBLite consensus disorder prediction 1 23 - -
Bisa04g0355 249 PANTHER DNA-BINDING DOMAIN 86 199 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0355 Bisa-ChrBisa04 6426025 6426774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0355 15 177 AP2-EREBP Transcription Factor Family AT4G34410 45.545 7.49e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa04g0355 AP2 3.4e-15 CL0081