Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0326 ATGGGTTCGCTTCCTCCTCCTCAACTGAGCTTGGATTTGAGGCCCGCTTTTGTTCCCAAGACGATCACTGATTTTCTCTACGAGGTCTCCACGATCACTAGTGCGCCCGATAAGTTGTTGAGGCTCGATGATTTTGTCGAGAGATTGGAAGAGGAAATGAATAAGATTGACGCCTTCAGGCGCGAGCTTCCTCTCTGCATGCTCCTCTTGAATGAAGCAATTTCAGCTCTAAAGGAGGAATCGGCAAAATTCAGGACACCTAATTCTCAGCCAGTATTGGAAGAATTTATTCCCTTGAGGAAAGAATGTGATCAGAAGGAGAGAAATGAAAATGAGACAGAATGCAGAGATAAGAGGAATTGGATGAGTTCCGTACAGCTCTGGAACAGTGCTAATTGTTCCACCGCGAATAATGCCTGTGAACAAAAACAACATTATAAATTAGAAAACAAGAGAAACGAAGAAGAAGAACATTCTGTGGTTGAGGATCCTTTCCATTCTTGTAGAAACAGAAATGGGAGCAGGATGTTTATGCCTTTTACAACATACCCTGCTGTTCCTGTGACAACTGTGGCAACAAAGGAAGATAAGGAAGAGTCTGATATAAATGGACTTTCTCTAGTGACTCCTGGAATAAAAAATATGAGAGCGCGATCTATTGGTAGTGGATCAAGAATAAGCTCTACCAGAGCGGTTTCATCTTCTCCTTGCAGTGACCAACCAAGTTTACGCACAGGACAGCAGCAGACTGCCCGGAAACAGAGAAGGTGTTGGTCTCCGGAGTTGCACCGAAGATTTGTTAATGCCCTGCAGCATCTCGGAGGTTCTCAAGCTGCAACTCCGAAGCAAATTAGAGAACTCATGCAGGTTGATGGCCTGACTAACGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCATACTCGAAGACTTCCAGCGTCCACAGCTGCACTTGGTAATCAGTCTGTTGCAGTTCTTGGAGATTTATGGATGTCCCAAGACCGGTATAATGACTCCTCCAAGGGTAGCATTTCAGGCTCTGGGTCTCCTCAAGGTCCCCTCCAGTTAGCTTCAGGATCTAGGGGTGGGAGCTCCCCGACCGAGGAAGACAGCATTGAAGATGATGATGATGAAAAATCTAGGGAGCTATTGATGGAATAG 1164 0.4519 MGSLPPPQLSLDLRPAFVPKTITDFLYEVSTITSAPDKLLRLDDFVERLEEEMNKIDAFRRELPLCMLLLNEAISALKEESAKFRTPNSQPVLEEFIPLRKECDQKERNENETECRDKRNWMSSVQLWNSANCSTANNACEQKQHYKLENKRNEEEEHSVVEDPFHSCRNRNGSRMFMPFTTYPAVPVTTVATKEDKEESDINGLSLVTPGIKNMRARSIGSGSRISSTRAVSSSPCSDQPSLRTGQQQTARKQRRCWSPELHRRFVNALQHLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASTAALGNQSVAVLGDLWMSQDRYNDSSKGSISGSGSPQGPLQLASGSRGGSSPTEEDSIEDDDDEKSRELLME 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0326 387 Pfam Myb-like DNA-binding domain 255 306 IPR001005 -
Bisa04g0326 387 MobiDBLite consensus disorder prediction 220 255 - -
Bisa04g0326 387 FunFam Myb family transcription factor 252 310 - -
Bisa04g0326 387 SUPERFAMILY Homeodomain-like 250 311 IPR009057 -
Bisa04g0326 387 Coils Coil 136 156 - -
Bisa04g0326 387 MobiDBLite consensus disorder prediction 216 256 - -
Bisa04g0326 387 MobiDBLite consensus disorder prediction 338 387 - -
Bisa04g0326 387 NCBIfam myb-like DNA-binding domain, SHAQKYF class 253 308 IPR006447 GO:0003677
Bisa04g0326 387 Gene3D - 252 310 - -
Bisa04g0326 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 250 310 IPR017930 -
Bisa04g0326 387 MobiDBLite consensus disorder prediction 338 367 - -
Bisa04g0326 387 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 380 IPR044787 GO:0003700|GO:0006355
Bisa04g0326 387 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0326 Bisa-ChrBisa04 5935129 5937338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0326 8 332 G2-like Transcription Factor Family AT2G03500 38.279 6.90e-60 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa04g0326 Myb_DNA-binding 1.5e-06 CL0123