Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0299 ATGCCGCGACCCTGTTTCCACAAGCTTGTTCTTCCCTCCACGCTCCAATCCAAACAACTGAATATTCCAGATAATTTTCTGAGAAAATTCGGGGGTGAGGTTTCTACGGTTGCTACCCTCATTGTTCCCGATGGCAGTGTCTGGCGTGTAGGATTGAAAAAGGTGGGCAACAAAATATTTTTCCATGATGGTTGGCAGGATTTCGTTCAACGCTACTCCATTGGTGTCGGATACTTGTTGGTATTCAGATACGAAGGGAAATCATCTTTCAATGTTCACATTTTCGATCTGGCTACTTCTGAGATAAATTATCAATCAAACAAACGAAGCAGTAATGAAGGGACTTACTTTGCCAGTCAACATCTTAATTTTGACGATATTGAAGATGAAGACACCATTGAGTACTTGGATTCATCACATTCGTCCCATACTCCCTTTGCATTGCAAAACAAGGTTTATGCTGGATCTGTAGATCATTTGACACCCGAGAAGAGTTATACTTCTCCGGCATTGCAGAATTTGTTCAATGGGTCGAAACTTAACTCCATAAACTGGGGAGATGGTGGGAATACACTGTCTTCAAAGGGTGCGAATTCTCAAGACAATCAGTCAAGCAGAAATATCGGTGTTCAGTTTAACGCAGTCGAGTTTAAAAGGTCTACTGAAGAATTAAAATTGCGATTCTCTAATGAGGAAATGCAACGAGTTAAAAAAACTATAAAAAAGAAGCCCAGAATGGATCCTAATGGACAGGAACCTTCAGATCAACACGAAGAGGAGGTAGAAATGCGCTATAGATTTTACGAAAGTGCTTCTGCAAGAAAGAGAACTGTAACGGCAGAAGAAAGGGAAAGGGCAATTAATTCAGCAAAAGCATTTGAACCAGCAAATCCTTTCTGCCGGGTTGTCTTGCGACCCTCCTATCTATATAGGGGATGCATAATGTATCTGCCATCTTGCTTTGCAGAAAAGCATTTGAATGGGGTTTCGGGATTCATCAAACTCCAGACCTCCGATGGAAAACAGTGGCCCGTTCGCTGCCTTTACAGAGGAGGTAGGGCAAAGTTAAGCCAAGGGTGGTTTGAATTTTCTTTGGAGAACAATTTAGGCGAAGGCGACGTCTGTGTCTTTGAACTACTCAGAACGAAGGATGTTGTGCTGAAAGTTACCACATTTCGTGTATCCGAGGATGCTGGATTGTTGAACCCTCCTATGCATCAACGCCAAAACGTCAGCCCGGCTAAACTGTTGAACACTCCGATGCAGCAAAACAACATCCCAACCAAACTGATTAGAAACTAG 1302 0.4263 MPRPCFHKLVLPSTLQSKQLNIPDNFLRKFGGEVSTVATLIVPDGSVWRVGLKKVGNKIFFHDGWQDFVQRYSIGVGYLLVFRYEGKSSFNVHIFDLATSEINYQSNKRSSNEGTYFASQHLNFDDIEDEDTIEYLDSSHSSHTPFALQNKVYAGSVDHLTPEKSYTSPALQNLFNGSKLNSINWGDGGNTLSSKGANSQDNQSSRNIGVQFNAVEFKRSTEELKLRFSNEEMQRVKKTIKKKPRMDPNGQEPSDQHEEEVEMRYRFYESASARKRTVTAEERERAINSAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQTSDGKQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRTKDVVLKVTTFRVSEDAGLLNPPMHQRQNVSPAKLLNTPMQQNNIPTKLIRN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0299 433 CDD B3_DNA 4 96 IPR003340 GO:0003677
Bisa04g0299 433 SMART B3_2 300 395 IPR003340 GO:0003677
Bisa04g0299 433 SMART B3_2 6 98 IPR003340 GO:0003677
Bisa04g0299 433 Gene3D - 277 397 IPR015300 -
Bisa04g0299 433 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Bisa04g0299 433 PANTHER B3 DOMAIN-CONTAINING 3 383 - -
Bisa04g0299 433 Pfam B3 DNA binding domain 303 394 IPR003340 GO:0003677
Bisa04g0299 433 Pfam B3 DNA binding domain 7 96 IPR003340 GO:0003677
Bisa04g0299 433 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Bisa04g0299 433 Gene3D - 1 98 IPR015300 -
Bisa04g0299 433 CDD B3_DNA 298 393 IPR003340 GO:0003677
Bisa04g0299 433 SUPERFAMILY DNA-binding pseudobarrel domain 293 395 IPR015300 -
Bisa04g0299 433 ProSiteProfiles B3 DNA-binding domain profile. 300 395 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0299 Bisa-ChrBisa04 5611886 5615704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0299 1 399 B3 DNA Binding Superfamily AT3G18990 51.980 1.11e-131 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa04g0299 B3 3.8e-17 CL0405