Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0256 ATGGCGCCTTCGCCTGATTCATCACCATCATCGGAATCTCCTCCGCCACCGCCCTCAGATTCGTCCGATTCTTCATCTGACAATTCACCCCCTTCGTCGTCTTCACCTTCACCGCCCTCGCAGTCTCCTCCGCCGCAATCACCACCGCCGCAATCGCCTCCGCCGCAATCCCCGCCTCCACGATCACCTCCGCCATCGCCTCCGCAATCACCTCCGCCATCAGATGGTGGCGGTTCTTCTCCTTCCCCACCTCCACCACCATCCGACCAGAATAATGGTGGAGACAATAATGGCTCTTCACCTTCCCCACCTCCACCTTCTAGTGGTGGCGGAAACAATGACAAAGGTAATGGTGGAAAAGGCAATGGCGGAAACGGAAACAACAACAGATCGCCTTCCAACGGAGAGTTTTCACCTCCGTCACCAGCAAAGGGCAAAACTCCATCGCCACCGACTAAATCCTTACCGTCATCGGGAAACAGCGACGGCGGCGGCGGTCTGAGCCAGGGGGCTATAATTGGGTTGGCCGTCGGAGGGGTGGTGCTGCTACTTTTGATAATTCTCATCATCCGCTGGTGTTGCAGACGACGGAGGAAGATGAGACCTGGGGGTCCCATTATATACTACGCCAATGGAGGCCAAGTCTACCAAAATTGTATGGATAATGCAGGAAAGGGACAGAGTTACAAAGGCTACAGCAAGGGTGGTGACCAACACGTTATGAACATTCCATCATCCTTCGGAGGCAAGAACAGCGCGCCACCCCAGCCCATCTCCGGCAACCAGCAGAGCGGCATGATGAGTGACTCAAGCTACTCGGGGCCGGTGGGCCCGCTGGCGCCGCCGCCGCACCCGGCCGTGGCCCTGGGGTTCAACAAGAGCACCTTCTCCTACGAGGAGCTAGCCGCGGCGACCAACGGGTTCTCCCAAGGGAACCTCATAGGGCAAGGTGGGTTCGGGTACGTGTACAAGGGTGTGTTGCCCAACGGGAAGGAGATAGCCGTGAAGAGCCTCAAGTCCAAGGGAGGCCAAGGGGACAGAGAGTTCCAAGCCGAGGTTGAGATCATAAGTCGAGTCCATCATCGCCATCTTGTGTCGCTTGTAGGGTATTGCCTTCAAGACGGACAGAATCTTTTTGTCTATGAGTTTGTGCCCAACAAGACTATGGAGTATCATCTTCACGGTAAGGGTCGGCCCGTTATGGATTGGAACACCAGGCTCAAAATTGCAATTGGATCAGCCAAGGGACTCGCTTACTTGCATGAGGATTGCCACCCTCGAATCATTCACCGTGACATAAAGGGCGCGAACATCCTAATTGAGAACAACTTTGAAGCCAAGGTGGCAGATTTTGGATTGGCAAAGTTGACTCAGGACAACAACACTCACGTTTCCACTCGTGTAATGGGAACATTTGGGTACTTGGCTCCTGAGTACGCTTCAAGTGGAAAACTAACAGAGAAGTCCGACGTATTCTCATACGGTATTATGCTTTTGGAGCTTATAACTGGACGACCTCCTGTGGATACTACTGGAGATTATGAAGAGGACAGTTTAGTTGAATGGGCTAGACCCCTATGTGTAAAGGCGATGGAAAGTGGAAGCTTTGAAGGACTAGCGGATCCAAAACTGGAGAACAATTTTAACATATCGGAGATGGCACGTATGGTGGCTTGTGCTGCAGCCAGTGTCAGGCACTCTGCAAGAAGAAGACCAAAAATGAGCCAGATTGTACGTGCGCTAGAGGGCGACGTGTCCCTGGACGACCTGAGCAGCGACGGCGTGAGGCCCGGGCAGAGCACGGTGTTTGGCACCGGCCGCAGCGTCGAGTATGACGCCGCCACATACAGCGCTGACATGAAGAGGTTCCGGAAGCTCGCTCTCGAAAGCGGCGTCGCCAGCAGCGACTACAGTCTCAACCCTTCAACATCCTCAGCATCAAGCGGTGAGCATTCCGATTATGGCGCCAAGTGA 1974 0.5431 MAPSPDSSPSSESPPPPPSDSSDSSSDNSPPSSSSPSPPSQSPPPQSPPPQSPPPQSPPPRSPPPSPPQSPPPSDGGGSSPSPPPPPSDQNNGGDNNGSSPSPPPPSSGGGNNDKGNGGKGNGGNGNNNRSPSNGEFSPPSPAKGKTPSPPTKSLPSSGNSDGGGGLSQGAIIGLAVGGVVLLLLIILIIRWCCRRRRKMRPGGPIIYYANGGQVYQNCMDNAGKGQSYKGYSKGGDQHVMNIPSSFGGKNSAPPQPISGNQQSGMMSDSSYSGPVGPLAPPPHPAVALGFNKSTFSYEELAAATNGFSQGNLIGQGGFGYVYKGVLPNGKEIAVKSLKSKGGQGDREFQAEVEIISRVHHRHLVSLVGYCLQDGQNLFVYEFVPNKTMEYHLHGKGRPVMDWNTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILIENNFEAKVADFGLAKLTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGIMLLELITGRPPVDTTGDYEEDSLVEWARPLCVKAMESGSFEGLADPKLENNFNISEMARMVACAAASVRHSARRRPKMSQIVRALEGDVSLDDLSSDGVRPGQSTVFGTGRSVEYDAATYSADMKRFRKLALESGVASSDYSLNPSTSSASSGEHSDYGAK 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0256 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Bisa04g0256 657 MobiDBLite consensus disorder prediction 633 651 - -
Bisa04g0256 657 MobiDBLite consensus disorder prediction 32 90 - -
Bisa04g0256 657 MobiDBLite consensus disorder prediction 633 657 - -
Bisa04g0256 657 ProSiteProfiles Protein kinase domain profile. 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0256 657 MobiDBLite consensus disorder prediction 247 277 - -
Bisa04g0256 657 MobiDBLite consensus disorder prediction 1 21 - -
Bisa04g0256 657 SUPERFAMILY Protein kinase-like (PK-like) 289 581 IPR011009 -
Bisa04g0256 657 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Bisa04g0256 657 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 179 626 IPR047117 -
Bisa04g0256 657 MobiDBLite consensus disorder prediction 109 140 - -
Bisa04g0256 657 Gene3D Phosphorylase Kinase; domain 1 285 383 - -
Bisa04g0256 657 SMART serkin_6 308 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0256 657 FunFam proline-rich receptor-like protein kinase PERK1 286 383 - -
Bisa04g0256 657 MobiDBLite consensus disorder prediction 247 271 - -
Bisa04g0256 657 FunFam Proline-rich receptor-like protein kinase PERK1 384 592 - -
Bisa04g0256 657 Pfam Protein kinase domain 309 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0256 657 Gene3D Transferase(Phosphotransferase) domain 1 384 591 - -
Bisa04g0256 657 MobiDBLite consensus disorder prediction 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0256 Bisa-ChrBisa04 4968541 4979428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0256 139 642 Trihelix Transcription Factor Family AT1G70460 49.140 1.40e-158 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa04g0256 Pkinase 2.9e-45 CL0016