Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0250 ATGGCCTCCGACAACTCCCCCGGTCACGCTCGGAGTGAGCTCTTGAAGACGACTCCATTTCTCGGTTTGAAGCTCTACATGGTGATCGGCATTTTGCTTGTTTTCGTAGTAGCGATTTTGCTTTTGATTTTACTATGCGTTCGCCGGAATCGGACCTCGACGAAGCGTAAAATGCGCGTGAAGCACAGTTCCGGCACGATTCCGTTGGTCTCGAAGGAGATCGTGGAGGTCAAATCGTTGGATCTTGAAGGGCACTTTGAGCAGACGGAGCTTAAAATCGAAGACGGTGATCCGAAGAAGGAGAAGGTTGAGATTGAGATTGAGAGTGAGAGAAGAGGGAAGAGGATAAGCGAGGAGAGTGACGTGTCCAGCGGGAGCCGAGGTGACGTGTCGGTTGAGGCACCGAACATAGGGTGGGGTCGGTGGTATAGCTTGCGGGAGCTGGAGAATGCGACACGTGGGTTTGCCGAAGAGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTACAGAGGAGTTCTTGAAGATGATTCCGTGGTGGCTGTGAAGAATCTTTTGAACAACAAGGGTCAAGCAGAGAAGGAATTCAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTGGGTTTGGTTGGATATTGCGCAGAAGGTCCTCAAAGGATGCTTGTTTATGAATATGTTGATAATGGAAATTTAGAGCAGTGGTTGCATGGCGATGTAGGGCCTGTTAGCCCATTGACATGGGATATACGCATGAAGATTGCTATTGGGACAGCAAAAGGGCTTGCCTATTTGCATGAAGGGCTAGAACCCAAAGTTGTGCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAAATGGAATGCCAAAGTATCAGACTTTGGACTGGCCAAGCTCCTAGGATCTGAGAAGAGCTATGTGACTACACGTGTAATGGGAACATTTGGATATGTTTCACCTGAGTATGCAAGCACAGGAATGCTTAATGAGGGAAGTGACGTGTATAGCTTTGGAGTTCTACTCATGGAGATAATTACAGGAAGAAGCCCCATTGACTATTCTAGACCACCTGGAGAGATGAATTTGATTGATTGGTTCAAGAGTATGGTAGCAAGTCGTCGTGGTGAAGAGCTGGTAGATCCTTTGATTGAGGTTCAGCCGCCTCCGAGATTCTTGAAGCGAGCTTTGCTGGTTTGTCTGCGCTGTATAGATTTGGATGTCAGCAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTCGAGGCAGATGATTTCCCCTTTCGTTCTGAACTTCGGACAATAAGAGAGAGAGAGCCTGTTTCCTCTTCTAATGCAGCTGTTTCCAGTATAGTTGCATATCCACCAAGACATGTGGAGTCCATAGGCCAATCCAGAGGGAGATGA 1422 0.4719 MASDNSPGHARSELLKTTPFLGLKLYMVIGILLVFVVAILLLILLCVRRNRTSTKRKMRVKHSSGTIPLVSKEIVEVKSLDLEGHFEQTELKIEDGDPKKEKVEIEIESERRGKRISEESDVSSGSRGDVSVEAPNIGWGRWYSLRELENATRGFAEENVIGEGGYGIVYRGVLEDDSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLIDWFKSMVASRRGEELVDPLIEVQPPPRFLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSELRTIREREPVSSSNAAVSSIVAYPPRHVESIGQSRGR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0250 473 FunFam Putative receptor-like serine/threonine-protein kinase 231 441 - -
Bisa04g0250 473 ProSiteProfiles Protein kinase domain profile. 155 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0250 473 CDD STKc_IRAK 161 427 - -
Bisa04g0250 473 SUPERFAMILY Protein kinase-like (PK-like) 139 437 IPR011009 -
Bisa04g0250 473 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524
Bisa04g0250 473 SMART serkin_6 155 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0250 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Bisa04g0250 473 Gene3D Transferase(Phosphotransferase) domain 1 231 437 - -
Bisa04g0250 473 PANTHER OS01G0323000 PROTEIN 10 448 - -
Bisa04g0250 473 PIRSF TyrPK_CSF1-R 159 247 - -
Bisa04g0250 473 PIRSF TyrPK_CSF1-R 246 452 - -
Bisa04g0250 473 PIRSF TyrPK_CSF1-R 6 52 - -
Bisa04g0250 473 Pfam Protein kinase domain 156 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0250 473 Gene3D Phosphorylase Kinase; domain 1 130 230 - -
Bisa04g0250 473 FunFam Probable serine/threonine-protein kinase At1g01540 135 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0250 Bisa-ChrBisa04 4904283 4908205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0250 135 427 Receptor kinase-like Gene Family AT4G02010 48.148 2.06e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bisa04g0250 Pkinase 2.8e-46 CL0016