Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0243 ATGGGAGTGCTTGGATCTTTAGACTTAATGGATCATCGACGGAGCATAGTTTCTTTCGGATTCTTGTTCTTGTTGCTTTCCCGCTTCACATTTCAACAGATTGAGCCTCTGAGTTCACCAATAGAGCGAGTAGCCCTACTTCAACTTCGATCCTCTTTGGGCTTGAGAAGCAGGGAATGGCCAGTAAAGGCCGACCCGTGCTTAATCTGGAATGGTGTGACCTGTGAGAATGGAAGAGTCATCGGGATCAATATTTCTGGGTTTAGAAGAACCCGAATGGGGAGTCGAAGCCCAGGATTCTCTGTTGATGCTTTAGCCTATTTGACCCACTTGCAACACTTCAATGCCTCCATGTTTCCTCTTCCTGGCCCTATTCCTCACTGGTTTGGCCTAATGCTTTCTTCACTTAGAGTGCTTGATCTTCGTTCTTGCTCCATCAATGGTGCAATTCCTTTTAGTCTTGGGAATCTAACATGCCTAACCAGTCTGTATTTATCTGATAATAACCTTACTGGGATTATTCCTAATAGTCTGAGTGAACCGTTAGGCCTTTCTGTTCTTGATCTTTCACAGAATTCTCTCACTGGATCCATTCCATCATCCTTTGCCTCTCTTGGGAATCTTTCTTTCCTTGACATTTCTTCCAACTATTTATCCGGGTCGATTCCCCCGGGCATAGGGGCTCTTTCAAAGTTGCAATACTTGAATCTTTCTAACAATGGCGTAACTTCTTCTATACCTGCTCAGCTCGGGGGTCTTAGAAGCTTAGTTGACCTTGATCTAAGTAAGAATTCTTTGTCTGGTTTGGTCCCTCCGGATTTGATTGGGTTGAGGAGCTTGCAGAGAATGATACTTGATAACAACATTCTTGAAGGACCTTTTGCTGATAACTTGTGGTTTCTGCCAAGAATGAGTTTTCTTGATATCTCATGTAATAACTTCACTGGTGCTCTTCCTAATTTTAGTTCTGTTAATGCTACTGCTGCTGTGGGGCTCAACATATCTCATAACCTTTTTTATGGAAGCATCACTCCTCTGCTCTGTTGCTTCAGTTTCATTGATCTTTCAAACAATTATTTCGAGGGCAAGGTTCTAGATTCTGAGCTTAATGCATCTCTAGACAACAACTGCCTCCAAAATGTGTCGAATCAGAGGATAACAGTAGAATGTGCATCATTCTATTCTGAGAGGGGCCTTGCATTTGATAATCCCGGGCACTTGAATTTGACAGGATATCATACAGCAGAAAGCTCGGGGAAGAGCAACAAAACAAAGATCATATTAGCAGGAGCCTTGGGTGGATTTGGTTTAGTTGCAATTTTAGTGCTGTCACTGGCATTGTTGCTTCTGTGTACTCGTAAGAGTGGTGATTTGACTAAAAAAGGTGTTGGTGTGTATGATGCTGTTGTTGGAGGCACTTGTCCACCTCCTGATGTATCGGGAAACTTTTTGAGAGTAGGAGACTCATTTACATATCGGCAGCTGCTCAAGGCCACTGGTGATTTCAGCGATGCAAATCTTATCAAACGGGGCCACATGGGTGATCTCTTCAATGGTGTTTTGGACAGTGAGATCCGTGTAGTTGTAAAAAGGATTGACATGCACTCAACTACAAATGAGAATGCTTACATATCGGAATTGGACTTTTTCAGTAAGGTTTCTCATACAAGAATTGTTCCTCTGTTGGGTCATTGCTTAGAAAATGAGAATGAGAAGTTCCTGGTTTATAAACATATGCCAAATGGGGACCTGTTGAATTGCTTGTACAACCGAAAAATTACATCTGAAGATGGTACATTGCAGTCATTGGATTGGATAACAAGGTTAAAAATTGCTATTGGAGTAGCAGAGGCCCTATCTTACCTGCATCATGAATGCTATCCACCCTTTGTTCACAGGGATATTCAAGCAAGCAGTATACTTCTAGACGATAAATACGAGGTTCGGTTAGGGAGTCTAAGTGAAGCCTGTAACCAAGAAGGAGATACTCATCAAAGCAAAATCACCAGGTTGCTGCGGTTACCCCAGTCCTCTGATCAAGGCACATCTGGTTCATCGACATCAATTTGTGCCTACGATGTCTATTGCTTCGGGAAAGTATTGCTTGAGATGATAACCGGCAAGCCGGGAATCAGTTCATCTGGAGATGCAGAACTAAAGGAATGGTTAGAACAGACACTACCTTACATCAGTGTATACGACAAGGAGCTCGTGACCAAGATCATTGATCCGACCATGGTCATCGATGAGGATCTCTTAGAGGAAGTGTGGGCAATGGCGATCATAGCGAGGTCTTGCTTGAATCCCAAGCCTTCAAGACGACCCCATACGAAATACATCCTCAAGGCTCTGGAAAACCCTCTGAAAGTTGTGAGGGAAGAACATTACAGCTCTTCAAGGCTCAGAGCAACCTCCTCCAGAGGCTCCTGGAATGCTGCCATATTTGGAAGCTGGCGTCACAGTTCTTCCGATGTAACTGTAATTCCAGCAGCCTCTGGATCAAGAGTTGAAGAAGGTGATTTTTCGTCGTCTCGCAGGCGGCATTTGACCGAGATATTCCCAGAACCGTCAAGTAGTACTTGA 2583 0.4359 MGVLGSLDLMDHRRSIVSFGFLFLLLSRFTFQQIEPLSSPIERVALLQLRSSLGLRSREWPVKADPCLIWNGVTCENGRVIGINISGFRRTRMGSRSPGFSVDALAYLTHLQHFNASMFPLPGPIPHWFGLMLSSLRVLDLRSCSINGAIPFSLGNLTCLTSLYLSDNNLTGIIPNSLSEPLGLSVLDLSQNSLTGSIPSSFASLGNLSFLDISSNYLSGSIPPGIGALSKLQYLNLSNNGVTSSIPAQLGGLRSLVDLDLSKNSLSGLVPPDLIGLRSLQRMILDNNILEGPFADNLWFLPRMSFLDISCNNFTGALPNFSSVNATAAVGLNISHNLFYGSITPLLCCFSFIDLSNNYFEGKVLDSELNASLDNNCLQNVSNQRITVECASFYSERGLAFDNPGHLNLTGYHTAESSGKSNKTKIILAGALGGFGLVAILVLSLALLLLCTRKSGDLTKKGVGVYDAVVGGTCPPPDVSGNFLRVGDSFTYRQLLKATGDFSDANLIKRGHMGDLFNGVLDSEIRVVVKRIDMHSTTNENAYISELDFFSKVSHTRIVPLLGHCLENENEKFLVYKHMPNGDLLNCLYNRKITSEDGTLQSLDWITRLKIAIGVAEALSYLHHECYPPFVHRDIQASSILLDDKYEVRLGSLSEACNQEGDTHQSKITRLLRLPQSSDQGTSGSSTSICAYDVYCFGKVLLEMITGKPGISSSGDAELKEWLEQTLPYISVYDKELVTKIIDPTMVIDEDLLEEVWAMAIIARSCLNPKPSRRPHTKYILKALENPLKVVREEHYSSSRLRATSSRGSWNAAIFGSWRHSSSDVTVIPAASGSRVEEGDFSSSRRRHLTEIFPEPSSST 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0243 860 Gene3D Phosphorylase Kinase; domain 1 481 578 - -
Bisa04g0243 860 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 108 785 - -
Bisa04g0243 860 SMART LRR_typ_2 253 277 IPR003591 -
Bisa04g0243 860 SMART LRR_typ_2 157 180 IPR003591 -
Bisa04g0243 860 SMART LRR_typ_2 205 228 IPR003591 -
Bisa04g0243 860 SMART LRR_typ_2 229 252 IPR003591 -
Bisa04g0243 860 Pfam Leucine rich repeat 231 288 IPR001611 GO:0005515
Bisa04g0243 860 Pfam Leucine rich repeat 160 218 IPR001611 GO:0005515
Bisa04g0243 860 ProSiteProfiles Protein kinase domain profile. 502 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g0243 860 FunFam Leucine-rich repeat receptor protein kinase EMS1 199 297 - -
Bisa04g0243 860 PRINTS Leucine-rich repeat signature 253 266 - -
Bisa04g0243 860 PRINTS Leucine-rich repeat signature 184 197 - -
Bisa04g0243 860 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 39 198 - -
Bisa04g0243 860 SUPERFAMILY L domain-like 103 373 - -
Bisa04g0243 860 Pfam Protein tyrosine and serine/threonine kinase 508 783 IPR001245 GO:0004672|GO:0006468
Bisa04g0243 860 SUPERFAMILY Protein kinase-like (PK-like) 483 784 IPR011009 -
Bisa04g0243 860 Gene3D Ribonuclease Inhibitor 200 415 IPR032675 -
Bisa04g0243 860 Gene3D Transferase(Phosphotransferase) domain 1 579 804 - -
Bisa04g0243 860 FunFam Predicted protein 475 578 - -
Bisa04g0243 860 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Bisa04g0243 860 Pfam Leucine rich repeat N-terminal domain 43 75 IPR013210 -
Bisa04g0243 860 FunFam Putative LRR receptor-like serine/threonine-protein kinase 579 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0243 Bisa-ChrBisa04 4820358 4824737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0243 42 676 Miscellaneous Gene Families AT2G16250 53.453 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Bisa04g0243 PK_Tyr_Ser-Thr 3.4e-24 CL0016