Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0242 ATGGCGTCAGCTGAAATTGAATACCGATGCTTCGTCGGTGGGCTTGCATGGGCCACCGACAATGAGGCCCTCGAGAAGGCCTTTTCTCCGTTCGGCGAGATCATCGAATCGAAGGTTATCAATGACCGTGAGACTGGCAGATCAAGAGGGTTCGGGTTTGTAACTTTTTCCTCTGAACAGGCCATGAGGGATGCGATTGAGGGGATGAACGGCCAGGATCTTGATGGACGTAATATCACCGTGAACGAGGCTCAGTCCCGTGGCCGTGGTGGCGGCGGAGGCGGTGGATATGGAGGTGGTGGTGGCGGTGGATACGGCGGCGGCGGCGGCGGTTACAGCCGTGGTGGAGGAGGATACGGTGGCGGCGGTCGCCGCGAAGGTGGATACAGTCGTGGTGGTGGAGACTACGGCGGTGGCGGTGGCGGTGGCTACGGTGGTGGATATGGCGGTGGACGTGACCGTAGCGGATACGGCGATGGTGGATCACGTTACTCCAGAGGTGGTGGTGCTTCTGAAGGAAGCTGGAGAAGTTAG 534 0.5955 MASAEIEYRCFVGGLAWATDNEALEKAFSPFGEIIESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGGYGGGGGGGYGGGGGGYSRGGGGYGGGGRREGGYSRGGGDYGGGGGGGYGGGYGGGRDRSGYGDGGSRYSRGGGASEGSWRS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0242 177 MobiDBLite consensus disorder prediction 123 177 - -
Bisa04g0242 177 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Bisa04g0242 177 MobiDBLite consensus disorder prediction 70 103 - -
Bisa04g0242 177 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Bisa04g0242 177 SMART rrm1_1 9 82 IPR000504 GO:0003723
Bisa04g0242 177 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
Bisa04g0242 177 Gene3D - 2 105 IPR012677 -
Bisa04g0242 177 CDD RRM2_NsCP33_like 9 84 - -
Bisa04g0242 177 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 6 157 - -
Bisa04g0242 177 FunFam Glycine-rich RNA-binding protein GRP1A 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0242 Bisa-ChrBisa04 4788317 4789138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0242 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 8.23e-06 43.5