Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa04g0242 | ATGGCGTCAGCTGAAATTGAATACCGATGCTTCGTCGGTGGGCTTGCATGGGCCACCGACAATGAGGCCCTCGAGAAGGCCTTTTCTCCGTTCGGCGAGATCATCGAATCGAAGGTTATCAATGACCGTGAGACTGGCAGATCAAGAGGGTTCGGGTTTGTAACTTTTTCCTCTGAACAGGCCATGAGGGATGCGATTGAGGGGATGAACGGCCAGGATCTTGATGGACGTAATATCACCGTGAACGAGGCTCAGTCCCGTGGCCGTGGTGGCGGCGGAGGCGGTGGATATGGAGGTGGTGGTGGCGGTGGATACGGCGGCGGCGGCGGCGGTTACAGCCGTGGTGGAGGAGGATACGGTGGCGGCGGTCGCCGCGAAGGTGGATACAGTCGTGGTGGTGGAGACTACGGCGGTGGCGGTGGCGGTGGCTACGGTGGTGGATATGGCGGTGGACGTGACCGTAGCGGATACGGCGATGGTGGATCACGTTACTCCAGAGGTGGTGGTGCTTCTGAAGGAAGCTGGAGAAGTTAG | 534 | 0.5955 | MASAEIEYRCFVGGLAWATDNEALEKAFSPFGEIIESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGGYGGGGGGGYGGGGGGYSRGGGGYGGGGRREGGYSRGGGDYGGGGGGGYGGGYGGGRDRSGYGDGGSRYSRGGGASEGSWRS | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa04g0242 | 177 | MobiDBLite | consensus disorder prediction | 123 | 177 | - | - | |
Bisa04g0242 | 177 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 8 | 86 | IPR000504 | GO:0003723 | |
Bisa04g0242 | 177 | MobiDBLite | consensus disorder prediction | 70 | 103 | - | - | |
Bisa04g0242 | 177 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 11 | 79 | IPR000504 | GO:0003723 | |
Bisa04g0242 | 177 | SMART | rrm1_1 | 9 | 82 | IPR000504 | GO:0003723 | |
Bisa04g0242 | 177 | SUPERFAMILY | RNA-binding domain, RBD | 9 | 118 | IPR035979 | GO:0003676 | |
Bisa04g0242 | 177 | Gene3D | - | 2 | 105 | IPR012677 | - | |
Bisa04g0242 | 177 | CDD | RRM2_NsCP33_like | 9 | 84 | - | - | |
Bisa04g0242 | 177 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN RZ1A | 6 | 157 | - | - | |
Bisa04g0242 | 177 | FunFam | Glycine-rich RNA-binding protein GRP1A | 2 | 112 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa04g0242 | Bisa-ChrBisa04 | 4788317 | 4789138 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa04g0242 | 10 | 88 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 32.911 | 8.23e-06 | 43.5 |