Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0235 ATGTTGCACTGTCTCAATACTTCGGGGAATCTCGCCGGAAACTGCTCTGACATGACGGTGTTGGAGAGGCAACGGCACAGGATGAGGTGGCAGCAACAACAACAACATCAACAACAACCGGAGCTTCAGAATCAGAGCCACGGATCCTACGGCGGAGCTTTTGCAAACGAGTTCAGCGGCGTCGGTTTCGGAATGGAATCAATCGGCGGTTCGGCGCTCGGCGAAGTCGTGGCTAAGTCGTCGTCCGCCGCCGTGAAGCCCGACCCTGTCTTCGAGAACGCGTGGCCCGATTTGGCCGCGATCCGAATGCCAGGCGCTTCCGGATTCGGATCTTCCCGCAGGTTTGATGCGAATTCGGCGGTTTCGACGAATTGCACGAGGGCGGTTACAGAGTCAGTTTCAGCGAAGGACTCGTCCAGTGGGAAGGAGAGCTTCAAGAAGAGAAAATCTGATAAGATTCACAAGGTTGTAGCAGAAAATGAGAACAAGAAAGAGAAGAAAATGAAAGGAAGTGTAGAAGAAGGGGATTCCAAATTAGTCACAGAGCAAAATAGCAACAAGAACGCCACGACGAATACAAACAACAACAATAACAACAACAACAACAAAACATGTGGAGGTACTTCAAAGGACAATTCGAAGGCATCGGAGGCTCAAAAGTCCGATTACATCCATGTCCGAGCACGCCGTGGCCAAGCCACGGACAGTCATAGCCTTGCTGAAAGAGTTAGGAGGGAAAAAATCAGCGAGAGAATGAAGTATCTGCAAGATTTAGTTCCAGGATGCAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAAATCATCAACTACGTTCAATCCCTTCAACGACAAGTTGAGTTCTTGTCCATGAAATTGGCTAATGTTAACCCAAGACTTGACTTCAATATTGATGATCTCTTCTCCAAAGAGGTGTTTGGCGCATGTGGTCCAAGCTTTGCAACAATGGCGATAGGATCTGACATGAACAACCAAGCATCCTATGTTCAGTTGAATTCAGCACAACAACAAATGTTGTCATCATGTTGTGGATTAGACATAGACATAGACACAGACATGGGCATGAACCCTAATGCTCAGTCCCACACAGACATGGCTCTGCTTAGAAGGAGCTTCAGTGCCCCTCTTTCCATCCCCCAAACCTTTTTTGAATCTTGTGGTTTCACTCAAATTCTGCCATCTACTTGGGAATCTGATTTTCATAATCTTTCGAATGTGCCTTTTGATCAAGCAAGACAACCAACATCCTTCACTTCTCAGCCATTCACAGCTTGA 1296 0.4707 MLHCLNTSGNLAGNCSDMTVLERQRHRMRWQQQQQHQQQPELQNQSHGSYGGAFANEFSGVGFGMESIGGSALGEVVAKSSSAAVKPDPVFENAWPDLAAIRMPGASGFGSSRRFDANSAVSTNCTRAVTESVSAKDSSSGKESFKKRKSDKIHKVVAENENKKEKKMKGSVEEGDSKLVTEQNSNKNATTNTNNNNNNNNNKTCGGTSKDNSKASEAQKSDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLANVNPRLDFNIDDLFSKEVFGACGPSFATMAIGSDMNNQASYVQLNSAQQQMLSSCCGLDIDIDTDMGMNPNAQSHTDMALLRRSFSAPLSIPQTFFESCGFTQILPSTWESDFHNLSNVPFDQARQPTSFTSQPFTA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0235 431 Pfam Helix-loop-helix DNA-binding domain 236 283 IPR011598 GO:0046983
Bisa04g0235 431 CDD bHLH_AtBPE_like 222 307 - -
Bisa04g0235 431 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 230 300 IPR036638 GO:0046983
Bisa04g0235 431 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 125 345 IPR024097 GO:0006355
Bisa04g0235 431 SMART finulus 238 288 IPR011598 GO:0046983
Bisa04g0235 431 MobiDBLite consensus disorder prediction 129 219 - -
Bisa04g0235 431 MobiDBLite consensus disorder prediction 26 49 - -
Bisa04g0235 431 MobiDBLite consensus disorder prediction 140 176 - -
Bisa04g0235 431 Gene3D - 229 302 IPR036638 GO:0046983
Bisa04g0235 431 MobiDBLite consensus disorder prediction 31 49 - -
Bisa04g0235 431 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 232 282 IPR011598 GO:0046983
Bisa04g0235 431 MobiDBLite consensus disorder prediction 177 214 - -
Bisa04g0235 431 FunFam Basic helix-loop-helix transcription factor 229 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0235 Bisa-ChrBisa04 4668976 4672578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0235 9 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 42.718 1.17e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa04g0235 HLH 2.5e-06 No_clan