Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0232 ATGTCGAATCTGAGTGTTCTTCCACGAAGGCCTGGACTACTCGAAATCAACGGTCGGGATTTGAATGCTCGACGCGACATCATTCGAGTTCTGGGATGGAACGATCTAGGTGAAGTCTTGGTGATGGCTTCTGTAAATCTAACGTCGAACAGCGAAACTGAGGATCTGCATTACGAGGAGGAAGAAGAAGAAGATGATGATGACGACGACGACGACGACGATGATGAAGAAAAAGAAGATGATGAAGTGAAGAGTGAGAGACGAAGGTTTGGGAATTTGGAAACGGTGAGAGTTGAAGAACCAGTGACGTGTGCGATATGTCTGGAGGAGATTTCATCAATCGAAGAAGACGAAGGAGAAGAAGAAGCAATTCGAATGAATTCGGATTCACATGAGTCTCATCCGTCTTGCCAATCAGATGGTGTTGATCGCCGGCTTTCGACAGAGGATCCGGGGGCAATTCGAATTCCGAAGCCATGCTTTCATGTGTATCATAAGAATTGCATACTCAAATGGCTGGCCAAGCATGATACTTGTCCTCTTTGTCGATACCAGATTCCAGCTTGTGATACTGATAATTAG 582 0.4553 MSNLSVLPRRPGLLEINGRDLNARRDIIRVLGWNDLGEVLVMASVNLTSNSETEDLHYEEEEEEDDDDDDDDDDDEEKEDDEVKSERRRFGNLETVRVEEPVTCAICLEEISSIEEDEGEEEAIRMNSDSHESHPSCQSDGVDRRLSTEDPGAIRIPKPCFHVYHKNCILKWLAKHDTCPLCRYQIPACDTDN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0232 193 SMART ring_2 104 182 IPR001841 -
Bisa04g0232 193 MobiDBLite consensus disorder prediction 116 146 - -
Bisa04g0232 193 SUPERFAMILY RING/U-box 103 187 - -
Bisa04g0232 193 MobiDBLite consensus disorder prediction 51 87 - -
Bisa04g0232 193 MobiDBLite consensus disorder prediction 55 80 - -
Bisa04g0232 193 Pfam Ring finger domain 155 183 IPR001841 -
Bisa04g0232 193 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 70 187 - -
Bisa04g0232 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 190 IPR013083 -
Bisa04g0232 193 ProSiteProfiles Zinc finger RING-type profile. 104 183 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0232 Bisa-ChrBisa04 4629445 4630026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0232 159 192 C3H Transcription Factor Family AT5G01980 52.941 6.90e-10 55.8