Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0231 ATGTCGAATCTGAGTGTTCTTCCACGAAGGCCTGGAATACTTGAAATCAACAGTCGGGATTTGAATGCTCGGCGGGAAATCCTTCGAGTTCTGGGACGGAACGATCGACGTGAAGTCTTGGTGATGGCTTCTGTAAATCTAATGTCGGACAGCGAAACTGAGGATCTGCATTACGAGGAAGAAGAAGAAGAAGATGATCATGATGATGATGAAGAGGAAGAAGATGAGGTGAAGCGTAAGAGACGAAGGTTTGGGAATTTGGAAACCGTGAGAGTTGAAGAATCAGTGACGTGTGCGATATGTCTGGAGGAGATTTCATCAATCGAAGAAGACGAAGAAGAAGAAGAAGCAAGTCCAATGAATCCGGATTCACAAGAATCCCATCTGTCTCGTCCCCAATCAAACGGTGCTAAGCATCAACACCGAGTAGAGGATCGGGGGGCAATTCGAATTCCAGAGCCATGCTTTCATGTGTATCATAAGAAATGCATACTAAAATGGCTGGTAAAGCATGATACTTGTCCTCTCTGCCGATATCGGATTCCGGCTTGTGATACTGATAAATAG 567 0.4497 MSNLSVLPRRPGILEINSRDLNARREILRVLGRNDRREVLVMASVNLMSDSETEDLHYEEEEEEDDHDDDEEEEDEVKRKRRRFGNLETVRVEESVTCAICLEEISSIEEDEEEEEASPMNPDSQESHLSRPQSNGAKHQHRVEDRGAIRIPEPCFHVYHKKCILKWLVKHDTCPLCRYRIPACDTDK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0231 188 MobiDBLite consensus disorder prediction 46 80 - -
Bisa04g0231 188 MobiDBLite consensus disorder prediction 122 136 - -
Bisa04g0231 188 ProSiteProfiles Zinc finger RING-type profile. 98 178 IPR001841 -
Bisa04g0231 188 SUPERFAMILY RING/U-box 97 182 - -
Bisa04g0231 188 Pfam Ring finger domain 150 178 IPR001841 -
Bisa04g0231 188 SMART ring_2 98 177 IPR001841 -
Bisa04g0231 188 MobiDBLite consensus disorder prediction 109 143 - -
Bisa04g0231 188 MobiDBLite consensus disorder prediction 54 73 - -
Bisa04g0231 188 Coils Coil 60 80 - -
Bisa04g0231 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 187 IPR013083 -
Bisa04g0231 188 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 72 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0231 Bisa-ChrBisa04 4624081 4624647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0231 154 187 C3H Transcription Factor Family AT5G01980 52.941 2.85e-09 53.9