Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0230 ATGTTGAACCTGAGTGAATTAGAGGACCAGTATTTCGAGGAAGAACATGAACATGAAGAAGAAGGAGATGATGATCATGAAGATAAAGAAGAAGAAGACGATGAATTGAAGAATCTAGAAAAGGTGAGAGTTGAAGATCAATCAGTGACGTGTGCGATATGTTTGGAGGAGATTTCATCAAGCGAAGAAGAAGAAGATGATGATGAAGAAGAAGAAGAAGAAGAAGAAATAATTCGATTTCCGAAGCCATGTTTTCATGTGTTTCATAAGAATTGCATACTTAAATGGCTGGCCATGCATGATACTTGTCCTCTTTGTCGATGTCAGATTCCGGCTTGTGATACTGATATTTAG 354 0.3757 MLNLSELEDQYFEEEHEHEEEGDDDHEDKEEEDDELKNLEKVRVEDQSVTCAICLEEISSSEEEEDDDEEEEEEEEIIRFPKPCFHVFHKNCILKWLAMHDTCPLCRCQIPACDTDI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0230 117 MobiDBLite consensus disorder prediction 58 76 - -
Bisa04g0230 117 MobiDBLite consensus disorder prediction 1 42 - -
Bisa04g0230 117 ProSiteProfiles Zinc finger RING-type profile. 51 107 IPR001841 -
Bisa04g0230 117 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 30 111 - -
Bisa04g0230 117 MobiDBLite consensus disorder prediction 55 76 - -
Bisa04g0230 117 Pfam RING-H2 zinc finger domain 50 107 IPR024766 GO:0008270
Bisa04g0230 117 Coils Coil 55 75 - -
Bisa04g0230 117 SMART ring_2 51 106 IPR001841 -
Bisa04g0230 117 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 113 IPR013083 -
Bisa04g0230 117 SUPERFAMILY RING/U-box 50 111 - -
Bisa04g0230 117 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0230 Bisa-ChrBisa04 4612722 4618101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0230 39 110 Rapid Response to Elicitors AT2G35000 37.500 4.24e-12 59.3